Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00047 ATGGGTTTGTGGTTCTATCTGCTAGCTTCAATTTGTGTATACACAACATTCCAAGCATTTCTAAACATCCTTAGAAACAAGAAACTTCCACCAAGCCCTCCAACAATACCTTTCTTAGGTAACATTTTTTGGCTTCTCAAGTCATCAAAGAACTTCGCTGATCTTGAACCTGTTCTTCGTTCCTTGCGTTCCAAGTATGGTGACATTGTCACCATTTACATTGGCTCCAAGCCTTCCATTTTCATAACATCCCATGAAGCTGCTCATAGAGCACTAGTTAAATCTGGTAATGTCTTTGCAAGTCGCCCAATGGCTCTTCAAACCATTCAAATCTTCTTCCCAAACCAATGTTCTGTTAGCACTTCCCCATATAGTCCAATTTGGAGAATGCTACGCCAGAATTTCATGCAAGTGATTCAACCTTCTCGGTTGAAATCATACTCAGCTTGTCGGAAATGGGCACTGAGAGAATTCAAGAGATGTGTTTTCAATGATATTAAATCTGGTAATAACAAAATGGTACCAGTTCAAGATTATATTAATTATACAATATATGTTCTGTTATCATATATGTGTTTTGGAGAGAGATTTGATGAGGAAACTGTGAAGAATATTCAAAGAGTGCAATACAATGTGATTCATAATTTCATTAGGTTTAATGTGCTGAATTTTCTGCCATTTTTGAACAAGATTTTGTTCAGAGGACTATGGAATGAAGTCATGGGAATTTGTCATGATAGAAAAAATATGTTACTTCCAATCATAAAAGCACGCCAGGTAAAAAAAATCAAAGCCAATAATAAGGTTGGTGGTGGTGAGTTGCAATTTGAGGCTTATGTTGATTCTCTTTTTGATAAGAAACTCCCAGAAAGTGGGAAGGAGTTAACAGATGAAGAGTTAGTGAGTTTGTGCTCTGAGTTCATGCTCGGCGGCACCGACACGACGGCTACAGCATGGCTATGGGCAATGGCCAACATAGTCAAACACCAAGATATACAAGAAAAGTTGTTTGATGAGATTAAGAAAGTTGTGAGACATGAGGAAGATATTATTGAAGAGGAAGACCTTAAAAAGATGCCTTATTTAGAGGCTGTGGTGTTAGAGACATTGAGGAGACACCCACCAGGTCATTTTATGTTGCCAAGGGCAGTGACACAAGACACTGTTATGGATGGTTATGTGATACCCAAAGATGCAATTGTTAATTTTCTTGTTGCTGAGATAGGGTGGGACCCAAATGTGTGGGAAGATCCAATGGAGTTCAAGCCTGAAAGGTTTATGAGGTATGGTGGTGAAGGAGATGATGATAAGTTTGATATAAAAGGGTTTAGAGAGATTAAGATGATGCCTTTTGGTGCTGGGAGGAGAGTTTGCCCTGCCATTGATATGGCAATACTTCATCTTAAGTTCTTTGTGGCAAATTTGGTGAGGGATTTTAGATGGACACTTGAAGATGGGTTTGAAGTTGACATGAGTGAAAAACAAACCTTTACTGTTGTGATGAAGAATCCATTGAGGCCATGTGTGTCCCCAAGATTCACTTGA 1545 0.3877 MGLWFYLLASICVYTTFQAFLNILRNKKLPPSPPTIPFLGNIFWLLKSSKNFADLEPVLRSLRSKYGDIVTIYIGSKPSIFITSHEAAHRALVKSGNVFASRPMALQTIQIFFPNQCSVSTSPYSPIWRMLRQNFMQVIQPSRLKSYSACRKWALREFKRCVFNDIKSGNNKMVPVQDYINYTIYVLLSYMCFGERFDEETVKNIQRVQYNVIHNFIRFNVLNFLPFLNKILFRGLWNEVMGICHDRKNMLLPIIKARQVKKIKANNKVGGGELQFEAYVDSLFDKKLPESGKELTDEELVSLCSEFMLGGTDTTATAWLWAMANIVKHQDIQEKLFDEIKKVVRHEEDIIEEEDLKKMPYLEAVVLETLRRHPPGHFMLPRAVTQDTVMDGYVIPKDAIVNFLVAEIGWDPNVWEDPMEFKPERFMRYGGEGDDDKFDIKGFREIKMMPFGAGRRVCPAIDMAILHLKFFVANLVRDFRWTLEDGFEVDMSEKQTFTVVMKNPLRPCVSPRFT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00047 514 SUPERFAMILY Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 505 - -
Stsc90625g00047 514 CDD CYP77_89 65 506 - -
Stsc90625g00047 514 Pfam Cytochrome P450 30 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00047 514 FunFam Cytochrome P450 family protein 24 514 - -
Stsc90625g00047 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00047 Stsc-Chr90625 283563 285107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00047 1 512 Cytochrome P450 AT1G64940 44.061 2.61e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00047 K24184 - gmx:102660230 733.021