Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00045 ATGGCGGTTGCTAGCTCAGATGGTGTCTTCTTGCAATGGAGACCTGAGGATCCCGATCCATGTAAATGGAATGGAGTGATATGTGATCCCAAGACCAAAAGAGTTACACATCTTGCTCTTCACAGCAACAACTTCTATGGGACAATACCATCAGAATTGGCAAACTGCACCGAATTGCAGGGAATCTTCTTACAGGGTAATTACCTTAGTGGAGTAATTCCAAGTGAAATAGGAAATCTCTCACAGCTCCAAAATTTGGACATATCAAGCAACTCACTTAGTGGGAATATCCCAACATCACTTGGGAGGTTGTATAATCTCAAATATTTTAATGTATCTACCAATTTTCTGGTTGGGCCAATACCTGCTGATGGTGTCCTTGCCAATTTTACTGGAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGGGTTCAACTCAATTCAACATGTAAAGCTGATGGTTCGCCTGGGTCAAATATTCAATCTAATTCTTCAGACCAAAATCAAAATGGAAAGAAGAAATATTCTGGAAGGCTGCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGTTTTTGGGGTTGTTTTCTTTATAAGAAATTTGGCAAAACTGACAAAATAAGTCTTGCAATGGATGTCAGTGGAGGTGCGTCAATTGTAATGTTCCATGGCGATCTACCGTATTCTTCAAAAGACATCATTAAGAAACTTGAAACTTTAAATGAGGAACACATAATAGGGATAGGGGGTTTCGGAACTGTCTACAAGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTGAATGAGGGCTTTGACCGGTTTTTTGAGAGGGAGCTTCAAATTCTTGGTAGCATCAAACACCGTCATCTAGTGAACTTACGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATACGACTACCTACCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGATCTGAGCAACTTGACTGGGATTCACGGTTGAATATAATTTTGGGAGCTGCAAAAGGGCTTGCATACTTGCATCATGATTGTTCACCTAGGATCATACATCGAGACATAAAATCAAGTAACATTTTGCTTGATGGAAACTTGGATGCCAGAGTCTCTGATTTTGGACTGGCCAAACTTTTGGAGGATGAAGAATCTCACATCACCACAATTGTTGCTGGAACATTTGGTTATCTAGCTCCTGAGTACATGCAAAGTGGTAGAGCAACTGAGAAGACTGATGTCTATAGTTTTGGTGTACTGACACTTGAAGTGATAAGTGGAAAGCGGCCAACAGACGCGTCATTCATTGAAAAGGGTCTCAACATTGTTGGCTGGCTGAATTTTCTCATAACTGAAAATAGGCCGAGGGATATAGTTGATCCTCTTTGCGAAGGGATACAAGTTGAGAGCCTTGATGCCTTGCTCTCTGTGGCCATTCAATGTGTTTCCTCAAGTCCAGAGGATCGACCAACGATGCACCGGATTGTACAGTTGCTTGAATCGGAGGTCTTGACTCCATGCCCAAGTGATTTCTATGACTCCGAGTAA 1590 0.4145 MAVASSDGVFLQWRPEDPDPCKWNGVICDPKTKRVTHLALHSNNFYGTIPSELANCTELQGIFLQGNYLSGVIPSEIGNLSQLQNLDISSNSLSGNIPTSLGRLYNLKYFNVSTNFLVGPIPADGVLANFTGSSFVGNRGLCGVQLNSTCKADGSPGSNIQSNSSDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKTDKISLAMDVSGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELQILGSIKHRHLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVISGKRPTDASFIEKGLNIVGWLNFLITENRPRDIVDPLCEGIQVESLDALLSVAIQCVSSSPEDRPTMHRIVQLLESEVLTPCPSDFYDSE 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00045 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Stsc90625g00045 529 Gene3D Phosphorylase Kinase; domain 1 219 321 - -
Stsc90625g00045 529 ProSiteProfiles Protein kinase domain profile. 246 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90625g00045 529 SUPERFAMILY L domain-like 8 124 - -
Stsc90625g00045 529 SUPERFAMILY Protein kinase-like (PK-like) 229 513 IPR011009 -
Stsc90625g00045 529 Gene3D Ribonuclease Inhibitor 2 152 IPR032675 -
Stsc90625g00045 529 Pfam Leucine rich repeat N-terminal domain 5 29 IPR013210 -
Stsc90625g00045 529 Pfam Protein kinase domain 248 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90625g00045 529 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 150 - -
Stsc90625g00045 529 SMART serkin_6 246 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90625g00045 529 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 322 524 - -
Stsc90625g00045 529 ProSitePatterns Protein kinases ATP-binding region signature. 252 278 IPR017441 GO:0005524
Stsc90625g00045 529 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 514 - -
Stsc90625g00045 529 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 220 321 - -
Stsc90625g00045 529 Gene3D Transferase(Phosphotransferase) domain 1 322 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00045 Stsc-Chr90625 274589 280738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00045 2 522 Receptor kinase-like Gene Family AT2G35620 73.394 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Stsc90625g00045 Pkinase 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00045 - - gmx:100819230 964.911