Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00036 ATGTTGGACATTCCCAAGGAATGTGAGAATGGGAAACTTGAAGTCATATTCAGCAGTAAGACTGTTGTAAAAGCTTCCAATCCTTTTCCAAAGCCTTTCTCGATCACACTCTCAAATCTTGACCTACTTTCAGGCCGTTTTCCAGTTACATACTTGTATTTTTACCGCAGGCCGCAAGTAGAGAACTTCAGAGCTGTTGTTGAGGCTCTCAAGACCTCTCTGGCACAAGTACTTAATCACTACTACCCTTTTGCTGGCCGAATTGCTGAAAATCCCAAAACCAGTGAGCCGGAAATCATTTGTGACAACAATGGTGCTCTATTCATTGAGGCACACATCAATGTTCCATTAAAGAGAATAGATTTCTATAATCTCAACGAAACTCTCCGAGGAAAGATAGTCTCCATTCAACCAGACTTCCCCTTGCAAGTTCAGGGAACAGACTACACTTGTGGAGGCATTTCCATAGCATTTACTTTTGACCATGCATTAGGGGATGCAAGTTCCTTTGGTAAATTTATTGCCTCCTGGTGTGAAATATCCCAAAATAAACCACTAACCTGTCTGCCGGACCACACTAGATCCCTTCGTGCACGTTCTCCTCCAAGATATCACCCATCCTTGGACCAAACTTTTATCAAATGCACCAAAGAAGAGATACAGAACATATCAATGAACCACATCTCACTTAAACGACTTTACCATATCAGTGCATCAGGTATTAACATGCTGCAGAGACTTGCATCTGTTAATGGCACAAAGAGAACTAAGATTGAGGCTTTCTCTGCCTATGTATGGAAGAAAATGATTGGTACCATTGATCAAAGCCATAAGAAGTGTAAGATGGGTTGGTTGGTCGACGGTAGAGAGAGAATGAGCACGGGTGGGAATTCCATGTCAAATTACATTGGCAATGTCCTATCTTTGGCTTTTGGGGAGGCAAGTATTCAAGAACTGAAGGAAGCCTCTATATCAGATATTGCTTACATGGTAAATGAGGCAATTTCAGAGGTGACCAATGAGGTTCATTTCTTGGACTTGATTGATTGGATCGAGTGTCATAGGCCTGGTTTGATGATAGCAAAGGCGGTCTTGGGTCAGGAAGGGCCAACCTTGGTCGTGTCCTCAGGAAGAAGGTTTCCAATCACTGAAATTGACTTTGGATTTGGGACTCCCTTGATAGGGACAGTATACACTTCCATTGAAAAGATTGGAGTTGGTTACATGAATCAAAGGCAAAGTGCCAAAGGTGATGGCTCTTGGATTGTGTCTGCTATCTTGTGGCCTGAACTTGCAGCTGCACTGGAGAGTGACCCAATTTTCCAGCCCATGTCTGCTTCTCATCTTCAACTTTAG 1356 0.4292 MLDIPKECENGKLEVIFSSKTVVKASNPFPKPFSITLSNLDLLSGRFPVTYLYFYRRPQVENFRAVVEALKTSLAQVLNHYYPFAGRIAENPKTSEPEIICDNNGALFIEAHINVPLKRIDFYNLNETLRGKIVSIQPDFPLQVQGTDYTCGGISIAFTFDHALGDASSFGKFIASWCEISQNKPLTCLPDHTRSLRARSPPRYHPSLDQTFIKCTKEEIQNISMNHISLKRLYHISASGINMLQRLASVNGTKRTKIEAFSAYVWKKMIGTIDQSHKKCKMGWLVDGRERMSTGGNSMSNYIGNVLSLAFGEASIQELKEASISDIAYMVNEAISEVTNEVHFLDLIDWIECHRPGLMIAKAVLGQEGPTLVVSSGRRFPITEIDFGFGTPLIGTVYTSIEKIGVGYMNQRQSAKGDGSWIVSAILWPELAAALESDPIFQPMSASHLQL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00036 451 Gene3D - 12 209 IPR023213 -
Stsc90625g00036 451 Gene3D - 214 437 IPR023213 -
Stsc90625g00036 451 Pfam Transferase family 14 438 - -
Stsc90625g00036 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 30 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00036 Stsc-Chr90625 237440 238928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00036 38 394 Monolignol Biosynthesis Gene Families AT5G48930 25.729 8.92e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00036 - - gmx:100795616 733.021