Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00033 ATGATGGATTGCACAAAATGGTTATGCCTTCTATTTTGTGTAGTACTGCTATTGCTGAAGGCAGAATCTTCTTATGTTCCAATCACTTTTGTCCAGAATGCTGTCACAAAAGGAGCTGTTTGTTTGGATGGGAGTGCACCAGCTTACCATCTTGATAGGGGGTTTGGAGAAGGGATAAACAATTGGTTAGTTCAGTTTGAGGGAGGGGGATGGTGCAACAATGTTACCACTTGCCTTTCTCGGAAGAACGGTCGTTTAGGTTCATCTAAGAAAATGGCCAAGCAAATTGCCTTTTCAGGGATTTTAAATAACAGGAGAATTTTTAATCCTGATTTCTACAATTGGAACAGAGTCAAGATTAGGTACTGCGATGGTTCTTCATTTACAGGTGATAAGGAAGAAGTTAATCCAACAACTCAATTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCTGTCATGCAGGATTTACTTACAAAAGGAATGAAAAATGCTCGAAATGCTATCATATCTGGATGTTCAGCTGGAGGATTGACTTCGATATTGCATTGTGATCGCTTCCGAGCTCTATTGCCTGCAGGAGCTAAAGTTAAATGCCTTTCAGATGCCGGTTACTTTATCAACACACGGGATGTCTCTGGAACACAACACATTGAACAATTCTTCAGTCAAATTGTTGCAACACATGGCTCTGTGAAGAATTTGCCTCCATCCTGCACTTCAAGACTTAGTCCAGGGCTGTGCTTCTTCCCACAGTATTTGGTCTCCCAAATCAAAACACCAATCTTCTTTGTTAATGCAGCATATGACTCATGGCAGATTAAGAACATTCTGGCACCCGGAGTTGCTGATCCTGAAGGCCATTGGCATAGCTGCAAACTTGATATAAACAACTGTTCACCTGATCAACTTGAATTGATGCAAGGGTTTAGGGCACAGTTCCTAAGGGCACTAACTGTGCTAGGCAACTCTCCATCCAAAGGAATGTTCATAGACTCGTGCTACGCCCATTGCCAAACAGAAATGCAGGAAACATGGTTCAGAACTGATTCTCCCCTGTTGAACAAGACAACAATTGCAAAGGCTGTAGGAGATTGGTTCTTTGAACGAAAGACTTTCCGGCAGATCGATTGCCCTTACCCCTGCAATCCCAGCTGCCACAACCGTGTCTTTGAACCAGAAAACCAACCAGAAAAAAATGTGACCACCAAAGGAACTTCTTCAGATGCATCAAGAAGAAATCCAAATCCATGGTTCCCAAAGTTATCAAACAAGGGACAATGGATGGTGGTTTTGCGCATCAAGCAATTGATAATAAGTGGCCTTCTTCCAACCATGGTTGTTCTGGCTATTCTCTAA 1356 0.4255 MMDCTKWLCLLFCVVLLLLKAESSYVPITFVQNAVTKGAVCLDGSAPAYHLDRGFGEGINNWLVQFEGGGWCNNVTTCLSRKNGRLGSSKKMAKQIAFSGILNNRRIFNPDFYNWNRVKIRYCDGSSFTGDKEEVNPTTQLHFRGARVFAAVMQDLLTKGMKNARNAIISGCSAGGLTSILHCDRFRALLPAGAKVKCLSDAGYFINTRDVSGTQHIEQFFSQIVATHGSVKNLPPSCTSRLSPGLCFFPQYLVSQIKTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLELMQGFRAQFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFRTDSPLLNKTTIAKAVGDWFFERKTFRQIDCPYPCNPSCHNRVFEPENQPEKNVTTKGTSSDASRRNPNPWFPKLSNKGQWMVVLRIKQLIISGLLPTMVVLAIL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00033 451 PANTHER NOTUM-RELATED 14 387 IPR004963 GO:0016787
Stsc90625g00033 451 Pfam Pectinacetylesterase 20 371 IPR004963 GO:0016787
Stsc90625g00033 451 SUPERFAMILY alpha/beta-Hydrolases 138 271 IPR029058 -
Stsc90625g00033 451 MobiDBLite consensus disorder prediction 392 418 - -
Stsc90625g00033 451 MobiDBLite consensus disorder prediction 394 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00033 Stsc-Chr90625 213768 219676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00033 1 396 Carbohydrate Esterase AT4G19420 61.949 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00033 K19882 - gmx:100776478 734.947