Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00032 ATGAGGAAGATCTGCGTCCTCCATTTGTTCAGCTCCAAGCGAGTCTCTGGATTCTACCACATAAGAAAATCTGAAGTGGAAAGAATGCTTGCCAAGATATCAGAGCACGTGAGTTCTTCTCAAGCTACCAATGTGAGTGAGATGTTAATGTCAGTTTCGAATTCTATAGTGTGCAGGATTGCGTTCGGAAGAAGGTATGACGAGGAAGGAGCGGAGAGGAGTAGGTTCCATGGGTTGCTGAATGAGATCCAAGCTATATTTCTTGCTTTCTTTGTTTCGGATTATGTTCCGATGATGGGTTGGGTTGATAAGGTAACTGGCTTGGTGGATCGAGTTGAAAAGACTTTCAAGGAATTGGATGAGTTTCTTGAAGGAGTAATTGAAGAGCATCAAGGTGAAGAAGATGAAAAGAGAGGAGAGGATAGGGATATAGTTGATGTGTTACTTCAACTGAAGGAGGAGGGTAATTTGTCAATACAGTTAACCAATGATCATATTAAAGCTGTTATCATGAACATGCTTGTAGCAGCATCGGATACAACTGCAGCCACAACAACTTGGATAATGACAGCACTGATGAAAAATCCAAGAGTGATGAAGAAAGCTCAAGAAGAAATTCGAAGTTTCTATGGACATAAACAATTCATAGAAGATGAAGATATTCAAAAGCTAGTTTATCTCAAAGCAGTGATCAAAGAAACATTCAGATATTATGCACCTACACCATTGGTACCAAGAGAGTTCAGTAAAAAGAGCAACATAGCAGGGTACGAAATTGAGGCCAAGACTATAGTATATGTAAATGTCTTTGCCATCCATAGAGACCCTGAAACTTGGAAGGATCCAGAAGTGTTTTATCCAGAGAGATTCTTAGATAGCCATGTTAACTTCACCGGACAAGATTTCGAGCTGATTCCATTTGGCGCCGGACGAAGAATCTGCCCAGGGATATCGCTCGGATCTGCATCCGTAGAGCTCATAACTGCCAATCTCCTGAATTCATTTGATTGGGAAATGCCTCAAGGGATGAAAAGTGAAGACATAGACAATGAAGGACTTCCAGGACTCGCTAGGCACAAGAAGAATCATCTTTGCTTGGTTGCCAAGAACCATATCTGA 1119 0.4129 MRKICVLHLFSSKRVSGFYHIRKSEVERMLAKISEHVSSSQATNVSEMLMSVSNSIVCRIAFGRRYDEEGAERSRFHGLLNEIQAIFLAFFVSDYVPMMGWVDKVTGLVDRVEKTFKELDEFLEGVIEEHQGEEDEKRGEDRDIVDVLLQLKEEGNLSIQLTNDHIKAVIMNMLVAASDTTAATTTWIMTALMKNPRVMKKAQEEIRSFYGHKQFIEDEDIQKLVYLKAVIKETFRYYAPTPLVPREFSKKSNIAGYEIEAKTIVYVNVFAIHRDPETWKDPEVFYPERFLDSHVNFTGQDFELIPFGAGRRICPGISLGSASVELITANLLNSFDWEMPQGMKSEDIDNEGLPGLARHKKNHLCLVAKNHI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00032 372 SUPERFAMILY Cytochrome P450 1 366 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS E-class P450 group I signature 185 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS E-class P450 group I signature 52 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS E-class P450 group I signature 165 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS E-class P450 group I signature 304 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS E-class P450 group I signature 268 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS E-class P450 group I signature 314 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS E-class P450 group I signature 228 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS P450 superfamily signature 176 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS P450 superfamily signature 229 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PRINTS P450 superfamily signature 305 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 307 316 IPR017972 GO:0005506|GO:0016705
Stsc90625g00032 372 FunFam Predicted protein 174 366 - -
Stsc90625g00032 372 Gene3D Cytochrome P450 1 371 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00032 372 PANTHER CYTOCHROME P450 71B11-RELATED 1 369 - -
Stsc90625g00032 372 CDD CYP71-like 1 364 - -
Stsc90625g00032 372 Pfam Cytochrome P450 1 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00032 Stsc-Chr90625 211276 213482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00032 1 372 Cytochrome P450 AT4G31500 45.745 2.52e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00032 - - gmx:100806470 519.62