Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00031 ATGCTTTCATTTCTGAATTATCTGCTTCTTGCAATTCCTGTAATAGCAGTAGTGATAATTCATCATCACTCCAAGAAGAAACACAACAGTAGTACAAGAACCATTCCACCAGGTCCAACACCACTTCCCATCATAGGTAACCTTCACCAACTCGACAGTTCCAACCTCCATCTCCAACTATGGAGCCTCTCTAAGACCTACGGCTCCATTTTCTCCCTTCGAATCGGTTTCAAACCAGCCATAGTTATCTCCTCACCAAACCTCGCAAAGGACGTTCTCAAAGACCATGATCTTGAAGTTTCAAGCAGACCTCCCTCACTGGGACCCAACAGACTCTCTTACAACGGTTTGGATTTGATCTTCTCTCCCTACAGCCATTACTGGAGAGAAATGAGGAAGATCTGCGTCCTCCATTTGTTCAGCTCCAAGCGAGTCTCTGGATTCTACCACATAAGAAAATCTGAAGTGGAAAGAATGCTTGCCAAGATATCAGAGCACGTGAGTTCTTCTCAAGCTACCAATGTGAGTGAGATGTTAATGTCAGTTTCGAATTCTATAGTGTGCAGGATTGCGTTCGGAAGAAGGTATGACGAGGAAGGAGCGGAGAGGAGTAGGTTCCATGGGTTGCTGAATGAGATCCAAGCTATATTTCTTGCTTTCTTTGTTTCGGATTATGTTCCGATGATGGGTTGGGTTGATAAGGTAACTGGCTTGGTGGATCGAGTTGAAAAGACTTTCAAGGAATTGGATGAGTTTCTTGAAGGAGTAATTGAAGAGCATCAAGGTGAAGAAGATGAAAAGAGAGGAGAGGATAGGGATATAGTTGATGTGTTACTTCAACTGAAGGAGGAGGGTAATTTGTCAATACAGTTAACCAATGATCATATTAAAGCTGTTATCATGAACATGCTTGTAGCAGCATCGGATACAACTGCAGCCACAACAACTTGGATAATGACAGCACTGATGAAAAATCCAAGAGTGATGAAGAAAGCTCAAGAAGAAATTCGAAGTTTCTATGGACATAAACAATTCATAGAAGATGAAGATATTCAAAAGCTAGTTTATCTCAAAGCAGTGATCAAAGAAACATTCAGATATTATGCACCTACACCATTGGTACCAAGAGAGTTCAGTAAAAAGAGCAACATAGCAGGGTACGAAATTGAGGCCAAGACTATAGTATATGTAAATGTCTTTGCCATCCATAGAGACCCTGAAACTTGGAAGGATCCAGAAGTGTTTTATCCAGAGAGATTCTTAGATAGCCATGTTAACTTCACCGGACAAGATTTCGAGCTGATTCCATTTGGCGCCGGACGAAGAATCTGCCCAGGGATATCGCTCGGATCTGCATCCGTAGAGCTCATAACTGCCAATCTCCTGAATTCATTTGATTGGGAAATGCCTCAAGGGATGAAAAGTGAAGACATAGACAATGAAGGACTTCCAGGACTCGCTAGGCACAAGAAGAATCATCTTTGCTTGGTTGCCAAGAACCATATCTGA 1509 0.4215 MLSFLNYLLLAIPVIAVVIIHHHSKKKHNSSTRTIPPGPTPLPIIGNLHQLDSSNLHLQLWSLSKTYGSIFSLRIGFKPAIVISSPNLAKDVLKDHDLEVSSRPPSLGPNRLSYNGLDLIFSPYSHYWREMRKICVLHLFSSKRVSGFYHIRKSEVERMLAKISEHVSSSQATNVSEMLMSVSNSIVCRIAFGRRYDEEGAERSRFHGLLNEIQAIFLAFFVSDYVPMMGWVDKVTGLVDRVEKTFKELDEFLEGVIEEHQGEEDEKRGEDRDIVDVLLQLKEEGNLSIQLTNDHIKAVIMNMLVAASDTTAATTTWIMTALMKNPRVMKKAQEEIRSFYGHKQFIEDEDIQKLVYLKAVIKETFRYYAPTPLVPREFSKKSNIAGYEIEAKTIVYVNVFAIHRDPETWKDPEVFYPERFLDSHVNFTGQDFELIPFGAGRRICPGISLGSASVELITANLLNSFDWEMPQGMKSEDIDNEGLPGLARHKKNHLCLVAKNHI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00031 502 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 Pfam Cytochrome P450 36 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Stsc90625g00031 502 FunFam Cytochrome P450 83B1 22 497 - -
Stsc90625g00031 502 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 CDD CYP71-like 66 494 - -
Stsc90625g00031 502 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00031 502 PANTHER CYTOCHROME P450 71B11-RELATED 18 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00031 Stsc-Chr90625 211276 213482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00031 8 502 Cytochrome P450 AT4G31500 45.090 9.32e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00031 - - gmx:100806470 662.914