Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00030 ATGGGGTCTAGTGGCAGCAAAGCCAATTCTTCTTCTGCAACTTGCAGTTCATCGTCTTCTTCTTCTTCTTCTTCGGGTAGTTTCAGAAAAGGTCGATCTAAGAGGCATAGAGGTTTCCCATCTTATTGTTTGGGAACAACTTCTGGATCTCATGACAGTGATCATGAAGACCAGGTTTGTGATCAGAACAAAGTAAATGGAAGTGGGGTTGATATAGTTTCGGATGAAGTGAAATCGAAATCCTTTAGAAAACTCAAGTATGATGATGAAATGCCTTCCAACATCGACCTTGACGAGTGGGATCATTCGGCATCCAGAACCGGTAGCAGCTCTAACCATGCTTCTTCAACTCAGTCTTTGAATCCTTCAAGTAGATTCCTTTCTCGCTTTAGCTTCATTCCTGGTAACATAAGCTTCAGACTTAGCAGAACCACCAGTCTTGGTTCTTCAAGGCCTTGTCCTGTTTCTTCTGGAAGTCTCACCATATTTAACAGTGAAGATGAGCTTAATCCTCATCGAAGCCCCCCTGGAAGCTTGATTAGTAGAAATGAAACTCGACAACGTAGAGAATTGCTTAATGCATCTTTTGGTAATCGAGTGCCAATTCAGTATCATGGAGGTGCTTCTACTGAGTTTAGATCTAATGCACCAGCTTTGAGTTCCTTTGGTAACTTACCAAGCAGTCCAATAATTTCTCCTGTCGAGGATGTGACTAGAGATGGGGATGGTACAAGAGAAGTGGTGGATATGAACTTGTTTTCTCCAAGGATTCATACGGAGGCAGAAAATGTTGAGACAAGACATACTGATAGACGAAATGGAGCTCGAGAGCCTGTAGACCGAAACGTACGCTTCAGCCGAACTTTAAGTGTTGGAAGACTTCGAGATAGAGTGCTCCGGCGATCAACATTATCTGAGTTCACGTTTGGCCCTCTGCAACAGGAGAGGGAAGTGGGGGAGAGGGATACAAGAGTGGCACAGGCTAGTCAAAATGCTGTGAATTCTCCAACTACAATTTCTAGCTCCCCATTTAGTGTCCAAGACTTTGATGTTGAGAATTCAAGATCTAGAGAAACAAGGTATCAAGATCTGCTGGAACACAGGTCTAATTTCCTTGAACGGAGAAGAAGAATACGATCCCAGGTTCGTGCTCTTCAGCGGTTGGGAAGCCGGTTTGAAAATCTCTCTGGCCATGACAGATCATGCATATTGTCTGGTCAGCACAGAAATGGTCGTTGTACATGCCGAAACGGTAGCCGTAATACAAATTCAACTGATGATACCAATGCTAGAGCTAGCATATCAAGGATTGTGATGCTAGCTGAAGCCTTATTTGAGCAATCGGTTGTTCTATCTTCCCGCCCTTCTGTGTCTTCTATTGGATCTGTTCCTGCACCTAATGAAGTTGTGGAATCTTTGCCTCTGAAATTATACACAAAGTGCCACAAACATCAAGAAGATGCTGTGCAGTAA 1473 0.4352 MGSSGSKANSSSATCSSSSSSSSSSGSFRKGRSKRHRGFPSYCLGTTSGSHDSDHEDQVCDQNKVNGSGVDIVSDEVKSKSFRKLKYDDEMPSNIDLDEWDHSASRTGSSSNHASSTQSLNPSSRFLSRFSFIPGNISFRLSRTTSLGSSRPCPVSSGSLTIFNSEDELNPHRSPPGSLISRNETRQRRELLNASFGNRVPIQYHGGASTEFRSNAPALSSFGNLPSSPIISPVEDVTRDGDGTREVVDMNLFSPRIHTEAENVETRHTDRRNGAREPVDRNVRFSRTLSVGRLRDRVLRRSTLSEFTFGPLQQEREVGERDTRVAQASQNAVNSPTTISSSPFSVQDFDVENSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRNGSRNTNSTDDTNARASISRIVMLAEALFEQSVVLSSRPSVSSIGSVPAPNEVVESLPLKLYTKCHKHQEDAVQ 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00030 490 MobiDBLite consensus disorder prediction 98 122 - -
Stsc90625g00030 490 MobiDBLite consensus disorder prediction 104 122 - -
Stsc90625g00030 490 MobiDBLite consensus disorder prediction 1 68 - -
Stsc90625g00030 490 MobiDBLite consensus disorder prediction 324 344 - -
Stsc90625g00030 490 MobiDBLite consensus disorder prediction 1 28 - -
Stsc90625g00030 490 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 490 - -
Stsc90625g00030 490 MobiDBLite consensus disorder prediction 315 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00030 Stsc-Chr90625 201246 203876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00030 228 480 C3H Transcription Factor Family AT5G45290 57.194 1.73e-76 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00030 - - gmx:100815830 657.521