Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00020 ATGCAAAATCACATCCATTCTTCTTCTTCCTCTTCTTGCACTGCTTTCAGTGCAATTCATGTGAGACATAGTGAACCCGTGCTTGTGGTTCCGGCAAAACCAATCCCAAAAGAAACAAAGCATGTTTCAGACATTGATGACCAAGAGGGTCTTCGCATCCATAACTACGACATTATGTTCTACAAAAGCAACCCTAGAATGAAAGCAAAAGACCCAGCAAAGGTGATAATGGAGGCCATATCTATGGCACTTGTGCATTACTATCCACTTGCTGGTGACTCAATTAGGCCACCATGCTTATCAATATGGAAACAGGTTTTGATCCATGTGCCTGGATCTGATATTATTATTGGTTGCCCTCTTTTGTTGATTCAGTTTCTTGAAATGGTGGCCACAATTGCCAGAGACCCACAAGCACTACTTATTCACCTGCCAGTGTGGCAACGACACATTTTCACCGCACGTGACCCACCTCGTGTCACGTGCAACCACCCCGAGTACGAGGATGATACCACGAACCACAACAATGAAGACCAAAACCACAACGACATGGCCCATGAATCTTTCTTCTTCGGCCCAAAACAGATCATGGCTCTCAGAAAACACCTCCCCAGCAACCTTAGCAAATGTTCAACACTAGAATTACTGGCAGCATGTCTATGGAAATGTCGTACCATAGCACTCGACATGAACCCTAACGAGGTTGTTTCCGTGTCATGCTTTATAACCGCTCATGGCAAGATCGGAATACCGAAGGGGTATTATGGCAACGCCTTTGCTTTTCCGGCGGCGGTATCGGAGGCGGGAACGCTGTGCCGGAAGCCGTTGAGTTATGGCGTTGAATTGATAAGAGAAGCGAAGGCTAAAATGAAGGAAGAGTATATAAGGTCAATGGTTGACTTTTTGGTGATGAAGGGGCGTCCGATGTACCGTAGTAGTACCGGTCACTTAATGGTGGGTGACCTGACACGTGTCGGTTTTGATGAGGTTGATTTTGGTTGGGGGAAGGCTGTGTATGGGGGCAGTATGGGTGCAAGACCATTGGTTAGCTTCCTTTGTAATTTCAGAAATGGAAGGGGTGAAGATGGGATTGTGGCGCCTATATTGTTGCCAAGGCTTGTTATGAAAAGGTTTCTTCTGGAGTTGCTGAAAATCACTGGTGATTATCAAGAGAATAAGTTTCATCATCATCGTCTTAATGATAAAATGGAAACAGACGGACGTAGATCCAAGTTGTAA 1239 0.4528 MQNHIHSSSSSSCTAFSAIHVRHSEPVLVVPAKPIPKETKHVSDIDDQEGLRIHNYDIMFYKSNPRMKAKDPAKVIMEAISMALVHYYPLAGDSIRPPCLSIWKQVLIHVPGSDIIIGCPLLLIQFLEMVATIARDPQALLIHLPVWQRHIFTARDPPRVTCNHPEYEDDTTNHNNEDQNHNDMAHESFFFGPKQIMALRKHLPSNLSKCSTLELLAACLWKCRTIALDMNPNEVVSVSCFITAHGKIGIPKGYYGNAFAFPAAVSEAGTLCRKPLSYGVELIREAKAKMKEEYIRSMVDFLVMKGRPMYRSSTGHLMVGDLTRVGFDEVDFGWGKAVYGGSMGARPLVSFLCNFRNGRGEDGIVAPILLPRLVMKRFLLELLKITGDYQENKFHHHRLNDKMETDGRRSKL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00020 412 Gene3D - 15 114 IPR023213 -
Stsc90625g00020 412 Gene3D - 120 165 IPR023213 -
Stsc90625g00020 412 PANTHER ACYL TRANSFERASE 4 20 93 - -
Stsc90625g00020 412 Gene3D - 166 380 IPR023213 -
Stsc90625g00020 412 Pfam Transferase family 22 93 - -
Stsc90625g00020 412 Pfam Transferase family 125 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00020 Stsc-Chr90625 149620 151793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00020 19 344 Monolignol Biosynthesis Gene Families AT5G48930 23.869 1.58e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00020 K19861 - gmx:100817429 404.06