Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90625g00011 ATGGAACTAAGTACCATGTTGTTTATCTTTGCTTCTTTGCTCTTCATCATTGTTCTATTTAGAACATTCATCAAACCCTATTATGTCTCCAAAAGAAAAGACTTGCCACTCCCACCTGGCTCCATGGGTTGGCCATACATAGGTGAAACATTTCAAATGTACTCTCAAGACCCAAATATCTTCTTTGCCGACAAAATCAAAAGGTATGGTTCTATGTTCAAGTCACACATTTTGGGGTGTCCATGCGTTATGATTTCGAGCCCAGAGGCAGCGAGATTCGTTCTGAACAAGGCTCAGTTGTTCAAGCCGACGTTCCCGGCGAGCAAAGAGAGGATGTTAGGGAAGCAAGCAATTTTCTTCCATCAAGGAGAATACCATGCTAACTTGAGGAGGCTTGTGCTTCGAACCGTCATGCCAGAAGCCATCAAGAACATCATAACCGACATTGAATCCATTGCACGAGATTCCCTCGCCTCTTGGCAAGGACGTTCCATTACTACTTTCCTTGAAATGAAAACATTCACGTTCAACGTTGCTCTGCTTTCAATCTTTGGGAAGGACGAAGTTCACTACAGAGAGGATCTGAAACGGTGCTACTACACATTGGAAAAAGGGTACAATTCAATGCCGATTAACCTTCCAGGGACGCTGTTCAACAAGGCGATGAAAGCAAGAAAGGAGATAGCAGAGATGGTTGAAGAGATAATAGTGAATAGGAGAGAGAAGAAGAAGGAACACAAAGACTTGCTTGGTTCTTTCATGGAGGAGAAGGCTGGACTCACCGACGAGCAAATAACAGATAACATAATTGGCGTCATTTTTGCTGCTCGTGATACCACAGCTACTGTGCTGACGTGGATTGTCAAGTACTTGGGTGAAAATCCCACTGTCCTTCAAGCTGTCACAGAGGAGCAAGAGGCCATATTGAAGAGGAAGGAAGAAAGTGGTGAGGAGAAGGGTCTAAATTGGGAAGATACCAAGAAGATGCCAATAACTTCAAGGGTCATACAAGAGACACTCAGAGTTGCATCTATTTTGTCTTTTACTTTCAGAGAAGCAGTTGAAGATGTGGAATATCAAGGGTATCTTATACCAAAAGGTTGGAAAGTGTTACCACTCTTCAGAAACATACACCACAGCCCTGATAATTTCAAAGAACCAGAGAAGTTTGATCCTTCAAGATTTGAGGTTGCTCCAAAAGCCAATACCTTTATGCCATTTGGCAGTGGGATCCACATGTGCCCTGGGAATGAATTAGCCAAGCTAGAGATCTTGGTGCTTCTACATCACCTCACCACTAAGTACAGGTTGGTAATCAAAACTTTCTACCAGAAATCTTGTTTAGCTTTGTTTGATTGTTTTTCAGTTTCATTTTGA 1377 0.4256 MELSTMLFIFASLLFIIVLFRTFIKPYYVSKRKDLPLPPGSMGWPYIGETFQMYSQDPNIFFADKIKRYGSMFKSHILGCPCVMISSPEAARFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTVMPEAIKNIITDIESIARDSLASWQGRSITTFLEMKTFTFNVALLSIFGKDEVHYREDLKRCYYTLEKGYNSMPINLPGTLFNKAMKARKEIAEMVEEIIVNRREKKKEHKDLLGSFMEEKAGLTDEQITDNIIGVIFAARDTTATVLTWIVKYLGENPTVLQAVTEEQEAILKRKEESGEEKGLNWEDTKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKANTFMPFGSGIHMCPGNELAKLEILVLLHHLTTKYRLVIKTFYQKSCLALFDCFSVSF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90625g00011 458 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 FunFam Abscisic acid 8 28 453 - -
Stsc90625g00011 458 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 CDD CYP90-like 66 436 - -
Stsc90625g00011 458 PANTHER CYTOCHROME P450 26 33 437 - -
Stsc90625g00011 458 Pfam Cytochrome P450 38 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 Gene3D Cytochrome P450 28 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 SUPERFAMILY Cytochrome P450 28 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90625g00011 458 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90625g00011 Stsc-Chr90625 74248 77435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90625g00011 1 438 Cytochrome P450 AT5G45340 73.349 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90625g00011 K09843 - gmx:100780737 782.711