Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90623g00052 ATGGTTGATGATTATAAGCATCAATCTAATACTCATTTTTGTGCTCAATTGTGTTGGGTAATGGACTTATTAGAGAGCAATTTGGAAGCCAAGTCCAAATTCTACAAGGACCCTAAATCGTGCTCTGTTTTCATGATCAATAATTTGAGGTACATTGTTCAAAAGGCGAAAAACAGCGAATTGGGTCTCATTTTGGGTGATGATTGGATCCATAACCACACTGCGAAAATTCATAGATTTCATGTGAGCTACCAGAGGAGTTCATGGAGTGAGGTGGTGGGGTTCTTTAAGGTAAAATAG 300 0.3833 MVDDYKHQSNTHFCAQLCWVMDLLESNLEAKSKFYKDPKSCSVFMINNLRYIVQKAKNSELGLILGDDWIHNHTAKIHRFHVSYQRSSWSEVVGFFKVK 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90623g00052 99 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 94 IPR004140 GO:0000145|GO:0006887
Stsc90623g00052 99 Pfam Exo70 exocyst complex subunit 7 94 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc90623g00052 99 SUPERFAMILY Cullin repeat-like 8 95 IPR016159 -
Stsc90623g00052 99 Gene3D Exocyst complex component Exo70 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90623g00052 Stsc-Chr90623 408606 408905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90623g00052 16 97 EXO70 exocyst subunit family AT1G07000 54.878 2.31e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90623g00052 K07195 - ahf:112719926 167.162