LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc90623g00041	ATGATGGCTACAGCTGCTTCTAAAATTTCAACTTCAATGGCTTCTCTAACTTGTTCTCACTTCTTCAACAATCATGTTCTTTCCATTCTGCATCTTCTTCTTCTTCTAATCAGCATCTCTTCCCTTCCAATTCTCGTTCAACCATTATCCTTCAACATAACCAACTTTGATGACCCTGCTAGTGCAGCCCAAATGGCATATGAAGGTGATGCAAGATCCAGCAATGGATCCATCGACCTCAACAAAGTCATCTATGACTTCAGGGTTGGCCGTGCCATCTACGGCCAACCCCTTCACCTTTGGGATTCAGCCACCAAAGCTCTCACAAGCTTCTCCACAAGCTTCACATTCACCATTGATGCAGTCAACGACACGAAGATCGGCGATGGTTTTGTGTTCTATTTAGCACCTCTTCACTACCAAATCCCACCAAATTCAGCTGGTGGAACTTTTGCTCTATTCAATGCAACAACCAACCTCAACAACCAACCACAAAATCATGTTGTGGCGGTTGAGTTTGACACATTTATTGGCTCAATTGATCCACCATTTCAGCATGTGGGGATTGATGATAACTCTCTAACTTCACTTGCTACTACTAGGTTTGATATTGACAACAACCTTGGTGTGAAGTGTTTCGCTTTGATTTCTTACGATGGTCCGACCAAGACACTCGCAGTGTCCTGGTCGTTTAGTGGAAGCAGTCGCAGCAGAAAAACTGCGACTGCTTCCACCTCGAATAGTTCTTCTTCGAATTCTTTGTCTTACAACATAGACCTCATGCAAGCTCTTCCAGAGTGGGTGAATTTCGGGTTTTCGTCCTCGACCGGGTTATCCACGGAGCGAAACGTTATCTATTCTTGGGAGTTTCATTCAACTTTGGGTGGGGAAATGGGGAAGGTTCAAAACAAGAAGCTGAACTTAGTTGTGGTGGTTGTCCCTGTAGTGGTTACAATTGTTTTATTGACTGTGGCGGTTATTATTGGTTGCTTGATCATCAAGAAGAGGAGAAAGAGGACTAATGTCGAAGGCGGTGGCGAATACTACTCTGGACAGTGCTCTGTCGAGTTTGATCTCGACAGAGCAACTTTCCCAAGGAGATTCGACTACAAAGAGTTGGTTGCGGCCACCGACGGTTTCGCAGATGACAAGAGGCTCGGACAAGGAGGGTCAGGAGAAGTCTACAAAGGCGTCTTGAGCTATCTAGGCAGAGTTGTAGCCGTGAAGAGGATCTTCGCCGACTTCGAAAACTCGGAGAGAGTTTTCAACAACGAGATAAGGATCATAAGCCGTTTGATTCACAAGAACTTGGTCCAATTCATAGGTTGGTGCCATGAGGAAGGAGAATTGCTGCTTGTTTTCGAGTACATGCCGAACGGAAGCCTTGACAGTCACCTTTTCGGTAACAAGAAGAGTCTGCCATGGAATTTGAGGTACAAAGCTGCCATAGGAGTGGCAAGGGCACTTCATTATCTCCATGAAGATGCAGAGCAATGTGTTCTTCATAGAGATATTAAGTCAGCTAATGTGTTGTTAGACAATGATTTTAGCACTAAGCTTGGTGATTTCGGCATGGCGAAATTGGTGGATCCAAGGTTAAGGACTCAGAGGACAGGGGTTGTAGGAACCTATGGGTACCTAGCTCCTGAATACATCAATGGAGGGAGGGCAAGTAAGGAGTCAGATATGTATAGCTTTGGAGTTGTGGCATTGGAGATTGCAAGTGGGAGAAGGACTTTTAGGGATGGAGAGTTTCATGTGCCAATAACAAGTTGGATATGGCAGCTTTATGTTGATGGGAATGTTATGGAAGGTGCTGATGAGAGGTTGAGTAAGGACTTTAATGTGAATGAAATGATGAGTTTGCTTACTGTTGGGTTATGGTGTACACACCCTGATGTTAAAGAAAGGCCAAAGGCAGCACAAGTTATTAAGGTTCTTCAGCTTGAGGCTCCATTACCAGACCTTCCTAAAGATATGCATCATAATATTGTTCTTCCACAACGTTCAGACACCGTGCAACAACCACATTGCTCCGGCGAATCGCCGCCGGCCATTACTACTAGTCTTGTTTACGGTGGACGGTAA	2088	0.4488	MMATAASKISTSMASLTCSHFFNNHVLSILHLLLLLISISSLPILVQPLSFNITNFDDPASAAQMAYEGDARSSNGSIDLNKVIYDFRVGRAIYGQPLHLWDSATKALTSFSTSFTFTIDAVNDTKIGDGFVFYLAPLHYQIPPNSAGGTFALFNATTNLNNQPQNHVVAVEFDTFIGSIDPPFQHVGIDDNSLTSLATTRFDIDNNLGVKCFALISYDGPTKTLAVSWSFSGSSRSRKTATASTSNSSSSNSLSYNIDLMQALPEWVNFGFSSSTGLSTERNVIYSWEFHSTLGGEMGKVQNKKLNLVVVVVPVVVTIVLLTVAVIIGCLIIKKRRKRTNVEGGGEYYSGQCSVEFDLDRATFPRRFDYKELVAATDGFADDKRLGQGGSGEVYKGVLSYLGRVVAVKRIFADFENSERVFNNEIRIISRLIHKNLVQFIGWCHEEGELLLVFEYMPNGSLDSHLFGNKKSLPWNLRYKAAIGVARALHYLHEDAEQCVLHRDIKSANVLLDNDFSTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGVVALEIASGRRTFRDGEFHVPITSWIWQLYVDGNVMEGADERLSKDFNVNEMMSLLTVGLWCTHPDVKERPKAAQVIKVLQLEAPLPDLPKDMHHNIVLPQRSDTVQQPHCSGESPPAITTSLVYGGR	695

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc90623g00041	695	Pfam	Protein kinase domain	381	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc90623g00041	695	SUPERFAMILY	Protein kinase-like (PK-like)	364	673	IPR011009	-
	Stsc90623g00041	695	ProSiteProfiles	Protein kinase domain profile.	380	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc90623g00041	695	ProSitePatterns	Legume lectins beta-chain signature.	169	175	IPR019825	-
	Stsc90623g00041	695	ProSitePatterns	Protein kinases ATP-binding region signature.	386	409	IPR017441	GO:0005524
	Stsc90623g00041	695	Gene3D	Phosphorylase Kinase; domain 1	365	456	-	-
	Stsc90623g00041	695	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	500	512	IPR008271	GO:0004672\|GO:0006468
	Stsc90623g00041	695	CDD	STKc_IRAK	386	648	-	-
	Stsc90623g00041	695	PANTHER	-	73	651	-	-
	Stsc90623g00041	695	FunFam	L-type lectin-domain containing receptor kinase IX.1	365	456	-	-
	Stsc90623g00041	695	FunFam	L-type lectin-domain containing receptor kinase IX.1	457	657	-	-
	Stsc90623g00041	695	SMART	serkin_6	380	649	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc90623g00041	695	ProSitePatterns	Legume lectins alpha-chain signature.	264	273	IPR000985	-
	Stsc90623g00041	695	SUPERFAMILY	Concanavalin A-like lectins/glucanases	47	294	IPR013320	-
	Stsc90623g00041	695	Gene3D	-	47	306	-	-
	Stsc90623g00041	695	Pfam	Legume lectin domain	49	295	IPR001220	GO:0030246
	Stsc90623g00041	695	CDD	lectin_legume_LecRK_Arcelin_ConA	49	294	IPR001220	GO:0030246
	Stsc90623g00041	695	Gene3D	Transferase(Phosphotransferase) domain 1	457	653	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc90623g00041	Stsc-Chr90623	308198	310445	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc90623g00041	34	660	Receptor kinase-like Gene Family	AT5G10530	44.219	3.60e-172	506

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Stsc90623g00041		Pkinase	5.6e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc90623g00041	-		-	gmx:100791220	835.869