Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90623g00015 ATGGGAACAACTCTGAGTTTTCCCAAAACTGAAAAGTTTTCTGAAGACGGCGAAAATGACTGTCTTAGATATGGTTTGTCTTCGATGCAAGGGTGGCGCGCATCAATGGAAGATGCGCATGCTGCACTTCTTGATGTGGATGCGTCCACTTCGTTTTTCGGTGTATATGATGGTCATGGAGGTAAGGCGGTTGCAAAGTTTTGTGCTAAGTATCTTCACCTTCAGGTGCTTAAGAGTAAAGCATATCTTGATGGAGATATAGCAGCTTCTCTTCAGAAATCTTTCTTCAGAATGGATGAGATGATGCGGGGTCAAAGAGGTTGGAGGGAATTAGCAGCCTTGGGTGATAAGAATATGAACAAGTTCAATGGGATGATGGAAGGTTTTATTCGGTCTCCACGCGGCAACAACAATGGTAATGGCCAAACTGATGATTGGACTTTTGAGGAGGGGCCCCATTCTGATTTTGCTGGACCAACTTCTGGAAGCACAGCTTGTGTAGCAATTGTTAAAGACAACCAACTTTTCATTGCAAATGCCGGTGATTCACGTTGTGTTTTATCTAGGAAGGGTCAGGCATTCAATTTGACAAGAGACCACAAGCCTGATCTTGCAATTGAGAAGGAAAGAATCTTAAAAGCTGGCGGTTTTATTCACGCAGGACGAGTTAACGGGAGTTTAAATCTTGCAAGAGCTATAGGTGATGTGGAATTTAAGCAGAATAAATTTCTCTCAGTTGAAACACAGATTGTTACTGCAAATCCAGATTTAAACACTGTTGATCTTTGTGATGAAGATGAATTTATGGTGCTCGCGTGTGATGGCATATGGGACTGCATGTCAAGTCAACAATTGGTAGATTTCATACGTCAAGAACTGCTCTTGGAAACAAAACTTTCTGCGGTGTGTGAACGAGTACTAGATCGTTGTTTGGCGCCGACAATTACTATTGGGGAGGGATGCGATAACATGACCATGATCTTGGTGCAGTTCAGAAAACCTTCCCAGTTCATGAACCAACAGAAGAGCAACACTCTTCAAATGAAGCAAAACTAG 1056 0.4252 MGTTLSFPKTEKFSEDGENDCLRYGLSSMQGWRASMEDAHAALLDVDASTSFFGVYDGHGGKAVAKFCAKYLHLQVLKSKAYLDGDIAASLQKSFFRMDEMMRGQRGWRELAALGDKNMNKFNGMMEGFIRSPRGNNNGNGQTDDWTFEEGPHSDFAGPTSGSTACVAIVKDNQLFIANAGDSRCVLSRKGQAFNLTRDHKPDLAIEKERILKAGGFIHAGRVNGSLNLARAIGDVEFKQNKFLSVETQIVTANPDLNTVDLCDEDEFMVLACDGIWDCMSSQQLVDFIRQELLLETKLSAVCERVLDRCLAPTITIGEGCDNMTMILVQFRKPSQFMNQQKSNTLQMKQN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90623g00015 351 SMART PP2C_SIG_2 28 331 IPR001932 -
Stsc90623g00015 351 PANTHER PROTEIN PHOSPHATASE 2C 20 330 IPR015655 GO:0004722|GO:0006470
Stsc90623g00015 351 ProSiteProfiles PPM-type phosphatase domain profile. 23 331 IPR001932 -
Stsc90623g00015 351 Gene3D - 1 332 IPR036457 -
Stsc90623g00015 351 SMART PP2C_4 12 329 IPR001932 -
Stsc90623g00015 351 CDD PP2Cc 23 331 IPR001932 -
Stsc90623g00015 351 Pfam Protein phosphatase 2C 143 314 IPR001932 -
Stsc90623g00015 351 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Stsc90623g00015 351 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Stsc90623g00015 351 SUPERFAMILY PP2C-like 3 333 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90623g00015 Stsc-Chr90623 82797 87545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90623g00015 1 335 PP2C-type Phosphatase Gene Family AT2G25070 74.328 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90623g00015 K17499 - gmx:100787778 562.762