Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90622g00062 ATGGCAGGTCTTGCTCCAAAACCCAAGGTTTTAAGAGATCGAAAATGGAAAGAGGAGGAAGCTACTGTATTAGTGCCAGGAGACATCGTAAGCATAAAATTAGGAGACATAATTCCAGCAGATGCTCGTCTCTTAGAAAGGGATCCACTCAAGATTGACCAATCGGCACTCACTGGTGAATCATTGCCTGTAACTAAGAATCTGGATTCTGAAGTCTACTCCGGTTCCACAGTGAAACAAGGAGAGATTGAAGCTATTGTCATTGCCACTGGAGTCCACACTTTCTTTGGCAAGGCTGCTCATTTGGTAGACAACATTAACCAAGTTGGCCACTTCCAAAAGGTACTATTATCTCATTAA 360 0.4278 MAGLAPKPKVLRDRKWKEEEATVLVPGDIVSIKLGDIIPADARLLERDPLKIDQSALTGESLPVTKNLDSEVYSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDNINQVGHFQKVLLSH 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90622g00062 119 Pfam E1-E2 ATPase 5 115 - -
Stsc90622g00062 119 PANTHER CALCIUM-TRANSPORTING ATPASE 1 116 - -
Stsc90622g00062 119 SUPERFAMILY Calcium ATPase, transduction domain A 7 103 IPR008250 -
Stsc90622g00062 119 Gene3D - 6 90 - -
Stsc90622g00062 119 Gene3D - 3 107 - -
Stsc90622g00062 119 FunFam Plasma membrane ATPase 6 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90622g00062 Stsc-Chr90622 448499 448954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90622g00062 6 118 Primary Pumps ATPases AT2G18960 84.071 1.87e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90622g00062 K01535 - atri:130814876 201.445