Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc8g00049 ATGGTGTTTTTTATAGTGTTGTTAGCTTTGTGGCAGACGGCGAGTGCGTTGGTGAAACTGCCACCAAATGTTACAGTTCCGGCGGTGATAGGTTTCGGAGATTCGATCATAGACCCTGGAAACAACAATGATCTTAAGACGCTCGTCAAATGCAATTTCCCTCCTTACGGAAAGGATTTTCAAGGAGGCCACCCAACGGGTCGTTTTTGCGACGGAAAAATCCCTACTGACCTTCTTGTTGAAGAATTGGGTATTAAGGAATTTTTGCCAGCATATTTGGATCCAAATCTAAAACCAAGTGACCTTGTTACTGGAGTATGCTTTGCTTCAGGTGCCACTGGATACGATCCCTTGACGCCAAAAATAACGTCAGTGATACCACTATCAGAGCAAATAGAGATGTTCAAAGAGTACATAGGGAAGCTTAAACAGATTGTTGGAGAAGAACAAACAAATTTCATTCTAGAAAACAGTTTATTCCTTGTGGTTGCTGGAAGTGACGACATTGCCAACACCTATTTTGTTGCTCGTGTTAGACAACTCCAATATGATATTCCTGCTTACACTGACCTTATGGTTAATTCAGCCTCTAATTTCATCAAGGAGCTATATGGACTTGGAGCAAGGAAAATTGGGGTACTGAGTGCACCACCGATTGGGTGTGTGCCGTCACAGAGAACTTTAGGTGGAGGCTTAGAAAGAGAGTGTGCAGAAGATTACAATTATGCAGCAAAAATGTTTAACTCAAAACTCTCAAAAGAATTGGATTCTCTTCACCAAAATTCACCCAATAGTAGGATCGTTTACATTGATGTTTACAACCCCCTTCTTGATATCATTCTCAACTACCAAAAATATGGTTATAAAGTTGTGGACCGTGGTTGCTGTGGAACAGGGAAACTTGAGGTTGCAGTGTTATGCAACCCTTTGGATGCCACGTGTCCGGATGCTTCTCAATATGTATTTTGGGATAGTTATCATCCAACTGAATCAGTGTACAGAGTCTTAATACAACAAGTTCTTGATAAATACATCGATAAATTGCTATGA 1050 0.4086 MVFFIVLLALWQTASALVKLPPNVTVPAVIGFGDSIIDPGNNNDLKTLVKCNFPPYGKDFQGGHPTGRFCDGKIPTDLLVEELGIKEFLPAYLDPNLKPSDLVTGVCFASGATGYDPLTPKITSVIPLSEQIEMFKEYIGKLKQIVGEEQTNFILENSLFLVVAGSDDIANTYFVARVRQLQYDIPAYTDLMVNSASNFIKELYGLGARKIGVLSAPPIGCVPSQRTLGGGLERECAEDYNYAAKMFNSKLSKELDSLHQNSPNSRIVYIDVYNPLLDIILNYQKYGYKVVDRGCCGTGKLEVAVLCNPLDATCPDASQYVFWDSYHPTESVYRVLIQQVLDKYIDKLL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc8g00049 349 CDD SGNH_plant_lipase_like 27 344 IPR035669 -
Stsc8g00049 349 Gene3D SGNH hydrolase 20 345 IPR036514 -
Stsc8g00049 349 FunFam GDSL esterase/lipase APG 18 345 - -
Stsc8g00049 349 Pfam GDSL-like Lipase/Acylhydrolase 31 338 IPR001087 GO:0016788
Stsc8g00049 349 PANTHER GDSL ESTERASE/LIPASE EXL3 8 340 - -
Stsc8g00049 349 SUPERFAMILY SGNH hydrolase 153 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc8g00049 Stsc-Chr8 259989 262083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc8g00049 23 342 Pollen Coat Proteome AT1G75910 39.009 7.47e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc8g00049 - - gmx:100793078 605.134