Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc8g00048 ATGGGTGTTTATTGTTACAGAGCAGAGGGTATAATTAAGCTACCAAGGAATGAAACCGTGACAGGAATGATATTTTTTGGTGACTCAATAGTGGACACAGGAAGTAACAATGAGTTACCAACATTGGCTAAGTGCAATTTCCTTCCATATGGAAGGGACTTTTTTGGCGGGAAACCAACAGGAAGATTCTCCAATGGCAAAGTCCCAACTGATTTTATAGCCGAAGAGATGGGAATGAAAAAGCTGATACCATCATATATGTCTCCAAGTTTGCAGCCTGCTGATCTCCTTGCGGGAGTCAGCTTCGCTTCCGGTGGCTCCGGCTACGATCCCCTGACTGCAAAACTTCTGTCGGTGATACCATTATCCGAGCAACTGCAGCAATTCAAAGAGTACATTGGAAAACTGAAAGCAAATTTTGGACAAGAAAAAACAAACTTGTTCCTGTCTAAAAGTATGGTATTTGTGGTAGCCAGCAGCAATGACATTGCCAACTCTTATTTCTCAACCGGAATCAGAAAAGCTCAATATGATGTTAACTCCTACACTAATATGTTGGCCCAAATTGCCTCTTCTTTCATCATGGAAATATATAAGTTGGGAGCAAGGAGAATCGGAGTAATAAATGCTCCCCCAATAGGATGCTTGCCATTTCAAAGAACTCTATTTGGAGGTATAGAGAGAAAGTGCTCCCAGGAAGTCAACGATGCATCAAAGTTGTTCAATGCTAAACTATCTACAGCCATCAACTCCCTGAGTCATAGACTCCCTCAAGCCAAGTTGGTAGACATCGATATATACAATCCTCTGCTTCATATCATTGAAAATCCATCAGAATATGGGTTTGAAGTTGTGGACAGGGGATGCTGTGGCACGGGGACTATAGAGGCTGCTATACTGTGTAACCCTTTGGATTTTGAAACCTGCAATGACAGTTCTAAGTATGTGTTTTGGGACAGTTTTCATCCTACACAGAGGACCTACCAGGTTCTTGTGAGTCAAGTTCTAAACAAATATACAAACAGCTTCTTTTGA 1035 0.4164 MGVYCYRAEGIIKLPRNETVTGMIFFGDSIVDTGSNNELPTLAKCNFLPYGRDFFGGKPTGRFSNGKVPTDFIAEEMGMKKLIPSYMSPSLQPADLLAGVSFASGGSGYDPLTAKLLSVIPLSEQLQQFKEYIGKLKANFGQEKTNLFLSKSMVFVVASSNDIANSYFSTGIRKAQYDVNSYTNMLAQIASSFIMEIYKLGARRIGVINAPPIGCLPFQRTLFGGIERKCSQEVNDASKLFNAKLSTAINSLSHRLPQAKLVDIDIYNPLLHIIENPSEYGFEVVDRGCCGTGTIEAAILCNPLDFETCNDSSKYVFWDSFHPTQRTYQVLVSQVLNKYTNSFF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc8g00048 344 PANTHER GDSL ESTERASE/LIPASE EXL3 20 335 - -
Stsc8g00048 344 FunFam GDSL esterase/lipase APG 12 340 - -
Stsc8g00048 344 SUPERFAMILY SGNH hydrolase 149 337 - -
Stsc8g00048 344 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 23 34 IPR008265 GO:0006629|GO:0016298
Stsc8g00048 344 CDD SGNH_plant_lipase_like 24 339 IPR035669 -
Stsc8g00048 344 Pfam GDSL-like Lipase/Acylhydrolase 24 333 IPR001087 GO:0016788
Stsc8g00048 344 Gene3D SGNH hydrolase 12 342 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc8g00048 Stsc-Chr8 253778 255577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc8g00048 17 341 Pollen Coat Proteome AT1G75910 37.805 8.84e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc8g00048 - - adu:107460126 611.298