LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc8g00047	ATGAAAGAGAATAAAAACTATCTAGTTTCCTTGCTGCTACTATTCTGCTGCTCTGTTCTCCTCTTGTGCCTGGCAGAGTCAGCAGATAATGACAATAATAATGATGAAGTTTATATAGTGTATATGGGAGCAGCAGATTCAACAGATCATGCTCATGTTCTCAACTTGGTCATAAGAAGGAACGAGAAGGCTCTAGTGCATAACTACAAGCATGGATTCTCAGGGTTTGCGGCTCGTTTAACAAAGGAAGAAGCCAACTCAATAGCTCAGAAACCAGGAGTGGTGTCTGTGTTCCCTGATCCAATTCTGAAGCTCCACACAACACGTTCATGGGAATTTTTAAAGTATCAAACTCATGTTAAAATCGATTCTCGCCCAAACACAGCACTCCCCAATTCCCAGTCATCAGACACCATCATTGGCATCTTAGATACAGGTATATGGCCAGAGGCGGAAAGTTTTGTGGACACGGAGATGGATGCTGTTCCATCCCGTTGGAAAGGTACCTGCATGAAATCACAAGATTTCAATTCATCAAACTGCAACAGGAAGATAATTGGAGCAAGGTATTACGGAGACTCTGATGACGGGGCGGGCACAGTGAGGGATTCCATTGGCCATGGCACTCACGTCTCTTCCACCGCCGCCGGTATCAACGTCGCAAATGCATCCTACTACGGTCTCGCCGAGGGAACTGCCGTCGGTGGCTCCCCACAATCCCGTTTGGCAATGTACAAAGTCTGCTCCGACTTCGGCTGCCGGGGCTCCGCCATCCTCGCCGCCTTTGACGACGCAATCAACGACGGCGTCGACGTCCTCTCTCTCTCCCTTGGCTCCCCCTCCGTCCTCCGACCAGACCTCGTATCCGATCCCATTTCCATCGGAGCCTTCCACGCGGTGGAGCGTGGGATCGTGGTGGTTTGCTCCGCCGGGAATGATGGACCGTCGTTGAAAACTGTTGTGAACGATGCTCCTTGGATTATAACTGTTGCTGCCACCACCATCGACCGCGAGTTTGAGTCTAACCTTGTCTTGGGCAACAAGAAAGTCGTCCAGGGCAATTCTATAAATTTCTCTCCGCTATCAAAGACACCAGATTATCCATTCATATATGGTTTGTCTGCCAAGACAAGCACCGCCACGGATTCTGAAGCAAGGCAATGCCATCCAAATACGTTAGATGAAACAAAGGTGAAAGGGAAGATCGTGTTATGCGATGGCCAAAATGATGATGGATTTTCAACTATTGGTAAGGCTTCAGTGGTGTCACAAGCAGGAGGATTAGGTCTGGTTCATGTCACTGAACAAGGTGGATCTGTGGCACAATTTTTAGGGGACTTTCCAGCAACCACCATAAGTCCAAAAGATAGTGCCCCAATCTTTGAGTATCTCAATTCCACTAGCAATCCAGTGGCAACAATTCTGAAAACAACTACAGTCATTAGTTATAAGCCTGCACCCGTTGTGGCATACTTCTCTTCAAGAGGCCCTTCAACACTTTCAAGTAATATTCTCAAGCCTGATATTGCAGCACCGGGAGTTAACATTGTTGCAGCATGGATTGGCAATGATGCAACAAATGTCCCAAAAGGACAAAACCCTTCAGCATACAACGTCCTCTCAGGAACTTCCATGGCATGCCCTCATGTCTCCGGCCTCGCGGCCAACGTTAAATCTCATAACCCCACCTGGACTCCCTCTGCTATCAAGTCAGCCATCATGACCTCAGAGGATTGTATATATCGATGTCTACCAACTTGGCTTGAGGGAGTCTATGACTCAGGGAGTTGA	1791	0.4791	MKENKNYLVSLLLLFCCSVLLLCLAESADNDNNNDEVYIVYMGAADSTDHAHVLNLVIRRNEKALVHNYKHGFSGFAARLTKEEANSIAQKPGVVSVFPDPILKLHTTRSWEFLKYQTHVKIDSRPNTALPNSQSSDTIIGILDTGIWPEAESFVDTEMDAVPSRWKGTCMKSQDFNSSNCNRKIIGARYYGDSDDGAGTVRDSIGHGTHVSSTAAGINVANASYYGLAEGTAVGGSPQSRLAMYKVCSDFGCRGSAILAAFDDAINDGVDVLSLSLGSPSVLRPDLVSDPISIGAFHAVERGIVVVCSAGNDGPSLKTVVNDAPWIITVAATTIDREFESNLVLGNKKVVQGNSINFSPLSKTPDYPFIYGLSAKTSTATDSEARQCHPNTLDETKVKGKIVLCDGQNDDGFSTIGKASVVSQAGGLGLVHVTEQGGSVAQFLGDFPATTISPKDSAPIFEYLNSTSNPVATILKTTTVISYKPAPVVAYFSSRGPSTLSSNILKPDIAAPGVNIVAAWIGNDATNVPKGQNPSAYNVLSGTSMACPHVSGLAANVKSHNPTWTPSAIKSAIMTSEDCIYRCLPTWLEGVYDSGS	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc8g00047	596	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	106	IPR037045	-
	Stsc8g00047	596	CDD	Peptidases_S8_3	103	576	IPR034197	-
	Stsc8g00047	596	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	38	578	IPR045051	-
	Stsc8g00047	596	Gene3D	-	336	481	-	-
	Stsc8g00047	596	Pfam	Peptidase inhibitor I9	37	106	IPR010259	-
	Stsc8g00047	596	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	207	217	IPR022398	-
	Stsc8g00047	596	Pfam	Subtilase family	136	576	IPR000209	GO:0006508\|GO:0008236
	Stsc8g00047	596	CDD	PA_subtilisin_like	342	474	-	-
	Stsc8g00047	596	ProSitePatterns	Serine proteases, subtilase family, serine active site.	542	552	IPR023828	-
	Stsc8g00047	596	PRINTS	Subtilisin serine protease family (S8) signature	203	216	IPR015500	-
	Stsc8g00047	596	PRINTS	Subtilisin serine protease family (S8) signature	135	154	IPR015500	-
	Stsc8g00047	596	PRINTS	Subtilisin serine protease family (S8) signature	541	557	IPR015500	-
	Stsc8g00047	596	SUPERFAMILY	Subtilisin-like	107	579	IPR036852	GO:0004252\|GO:0006508
	Stsc8g00047	596	ProSiteProfiles	Serine proteases, subtilase domain profile.	110	596	-	-
	Stsc8g00047	596	FunFam	subtilisin-like protease SBT1.5	336	481	-	-
	Stsc8g00047	596	Gene3D	Peptidase S8/S53 domain	137	576	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc8g00047	Stsc-Chr8	249598	254624	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc8g00047	8	506	Subtilisin-like Serine Gene Family	AT1G20160	59.208	0.0	581

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc8g00047	K25898		-	gmx:100820194	808.52