Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc89g00014 ATGGCCGACAAGCATGGACCCATTTTCACAATCAAGAGTGGCTCCAAGAAGACCATAATTCTCAGCAACTGGGAAATTGCCAAAGAATGCTTCACCACCAACGACTTGGCCGTTTCAACTCGTCCCACGAAGCTTGTCGCCAATGAAAACCTTTCTTACAACGGAGCCATGTTTGGTTTTGCACCGTACGGACCGTACTGGCGCCAAATCCGCAAGATTGTGACGTTAGAGCTTCTCTCGAATCGCCGTATTGAGCAACTAAGCCATATTCGTGTCTCTGAAGTTCAAGCTTCAGTGAAAGATTTATACAGTGTTTGGTGTAATAATAACAGAAATGAAGAGTACGTGTTGGTGGAGATGAAGAACTGGTTTGCAAAACTGATCTTCAACATGGTTTTTAGGATGCTTGTTGGGAAGAGATGCTTTGGATTTGGTGGTGTGGGAAATAATGATGATGATAAGGGGAATCGGTGTTTGGAGATTATAAGGGAGTTCATGAATTTGTTGGGGGTGTTTACAGTGGGAGATGTTGTTCCTTTTGTGAGGTGGTTGGATTTTGGGGGCCATGAGAAAGCGATGAAGAAAACTGCTAAGGAATTGGATGAGATTTTGGATGAATTGTTAAGTGAACATCGCCAGAAGAGGAGGAGATCATTAGATGAAAATGATGAGAAAGATTTTATGGATGTTATGGTTTCGGTTTTTGATGATGCCACTCGTATTGATGGATTTGATGCTGATAACGTAATCAAAGCCACAACCTTGGCTATGATTACTGGAGCAACTGATACAACCACTGTTACCCTTACATGGGCAATGTGCTTACTATTGAGAAATCCCCATACATTGAGAAAAGCAAAAGAAGAACTCCACACTCAAATTGGCAAAGAGAGATGCATACTTGAGTCTGATCTAAGTAAATTGCCTTATCTTCAAGCCATTATAAAAGAGACACTAAGATTGTATCCTCCTTCTCCACTTGGAGTTCATCGTGAATTCACAGAAGATTGCATTTTAGGTGGATACCAAATTGAAAAAGGAACTCGACTAATTACAAATCTTTGGAAAATTCACACCGACTCTTGTGTCTGGTCAGATCCCTTAGAGTTCAAGCCAGAAAGGTTTCACACAACTCATAAAAACATTGATGTTAAGGGTCATAATTTCGAGTTGTTGCCATTTGGAAGCGGTAGAAGGGTGTGTCCGGCGATATCCTTCGGCTTTCAAATGGTTCATTTTATTCTGGCTAACTTCTTGCATTCCTTTGAGATCTTGAATCCTTCCCCTGAACTAGTTGACATAGATGGAACCCTTGGAATAAACCATGTCAAAACTACTCCACTTGAGATACTAGTTAAGCCGTGTTTGATTCCTAATTGTTATGAGACTATGTAA 1395 0.4086 MADKHGPIFTIKSGSKKTIILSNWEIAKECFTTNDLAVSTRPTKLVANENLSYNGAMFGFAPYGPYWRQIRKIVTLELLSNRRIEQLSHIRVSEVQASVKDLYSVWCNNNRNEEYVLVEMKNWFAKLIFNMVFRMLVGKRCFGFGGVGNNDDDKGNRCLEIIREFMNLLGVFTVGDVVPFVRWLDFGGHEKAMKKTAKELDEILDELLSEHRQKRRRSLDENDEKDFMDVMVSVFDDATRIDGFDADNVIKATTLAMITGATDTTTVTLTWAMCLLLRNPHTLRKAKEELHTQIGKERCILESDLSKLPYLQAIIKETLRLYPPSPLGVHREFTEDCILGGYQIEKGTRLITNLWKIHTDSCVWSDPLEFKPERFHTTHKNIDVKGHNFELLPFGSGRRVCPAISFGFQMVHFILANFLHSFEILNPSPELVDIDGTLGINHVKTTPLEILVKPCLIPNCYETM 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc89g00014 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 394 403 IPR017972 GO:0005506|GO:0016705
Stsc89g00014 464 CDD CYP82 6 455 - -
Stsc89g00014 464 Gene3D Cytochrome P450 1 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PANTHER CYTOCHROME P450 82C3-RELATED 1 461 - -
Stsc89g00014 464 FunFam Cytochrome P450 82C4 1 453 - -
Stsc89g00014 464 Pfam Cytochrome P450 2 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 Coils Coil 190 217 - -
Stsc89g00014 464 PRINTS P450 superfamily signature 260 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS P450 superfamily signature 392 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 249 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 353 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 401 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 312 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 269 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 PRINTS E-class P450 group I signature 391 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc89g00014 464 SUPERFAMILY Cytochrome P450 1 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc89g00014 Stsc-Chr89 116610 119455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc89g00014 1 461 Cytochrome P450 AT4G31970 45.788 1.14e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc89g00014 - - gmx:100803451 598.971