Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc885g00002 ATGGAGTCATCATCGGCAATCAACAGTAGTTCTCCTAATCTTCCTCAAATGACTATGAATGCTGATGAAGTGATCAACAACAACGTCAGCGTAGATTATTATCAACATCAGGTTTATCAGAACATGAATGTAACCGAACCACTAACAATACAATCAAATCCTCCTCCGAATCAAGAATCAGATCCAATTTTCCCAATCAACAACAACATTTTCGGCGACAGCGGATTCAACCGAACAAGTGATGCTGACCTTAATTATTATTCTTCAGCAAATGCTCCTCCACATCAAGAACCAGATCTAAGTTTCGCGAACGGCGGAGGCATGAACAACAACATTTCCAGCGGATTCAGCCGTGCAAGTGACCTTCTGTTGATGGTGTCAATGTATGCAGAGCCAACAAAATCAGAGATCATAGCCCTCGCCGAGTCCGCCATGAATGAATTGTCGAAAATAGCCCTGGAAGGGCAGCCTCTGTGGGTTCCGCAGAAGGATAAGAGGTTCGAAACGATTAACGATATCGAATACTTGAGGAAGTTCGGTGAGGTTCACGAAATTGAATCGCTCAGGGAGATTATGAAGCTTGTTGAGGTTGGAAATGACACTTTCTCTTCTTCTCAGTACTTGTTGCCGGTCGTTGATTCCTTTCAGAGGGAGCTTGTTCCGTCGTCTCTCAGTGGAGTTCCCAAAGAAGCACTTCAAACTGAAGCTTCAAGGGATATGGCGTACCTTGAGATCAGTTCCACCAAGCTTCTTCACTTGCTCATGGATGCGAATGAATGGTCGAAAGAATTTGATAATATTGTGGCTAGGGCAGCGGTTCTAGGAACCTTGTCAAATGGAGCCGAAGAAAGCTATGATGGGAAAGTGCAAGTGATGTACGCGGAATATCATTTGCCTACACCATTTGTGGCATCAAGGGAGTGCTATTTTGCAAGGTACTGCAAGCAGTTGCCTTATGAAATGTGGGGTGTTGTTGATGTTTCTCTTGAGAAGTATTTTCCTTCTCTAGCAACCAATTTCCGAAGGAGGCCATCAGGCTGCTTGATTAAGCCAATGCCAGATGGATTCTCTAAGATAATATGGGTGGAGCATGTGGAAGCAGACCATAGCCAACTGAGCAACCATTTCCGGCCACTAGTCACAACGGGTTTGGCTTTTGGTGCAACTCGTTGGATTAATTCTATAATTAGGCACATTGATTCCTCTCAAATTATGGAGGCTACAACAGCTCCAATTTATGTCGATCATGGGGTTGTAATACCACAAGCAGGGAGGAAAAGTTTCCTTAACCTGGCAGACAGATTAGTGAGAAGCTTTTGTGGTGATATCAATGCTTCAATGGCGAATCAATGGATGCCATTAATAACTTCAGAATCTGATTCTTCAGATGTGAGGGTGATGATCAAGAATAACATTGAGGATCCTGGGAAACCTATTGCCACAACTGTGGTTTTTAGCACTTGTCTTTGGCTTAAAGTATCACCATCTCGCTTGTTCAATTTCTTGCGTCATGAAGATTCCAGAAACAAGTGGGATTTACTTTCACGTAAACTTACAATTCGGGAATTCGCATATATGAACAAAGGCATAAATACAGGGAATCGTGTTTCCTTAATGCGAGCAATGAATTCTCAAGACAAGATTGAGATCTTTTACATTCAAGAGAGCTACACAGACTCAACAGGATCCCATATTGTTTATGCTCCACTAGACGAATTTGCTTTGTCAGCTCTTGCAAATGGAGCAAACCCTGACAAGGTAATAGTCCTTCCATCAGGGTTTTCAATCCTTCCTTGTGGGTTCCCTAGTGATTATTATGGTGAAGATGGTGGAAGTGGATGCATCCTAACTATTGCGTTTCATATAATTGAGAGTCACAATGTCAGGCTATTTGTTCCTCCTGAATCAGTTATGACCATGAAAAAGATTATTTCAGACACCGTCATCAATATAAGAGATGCAGTGATGTATAATAATCACACTAACAATTGGCATTACAATTGA 2004 0.4217 MESSSAINSSSPNLPQMTMNADEVINNNVSVDYYQHQVYQNMNVTEPLTIQSNPPPNQESDPIFPINNNIFGDSGFNRTSDADLNYYSSANAPPHQEPDLSFANGGGMNNNISSGFSRASDLLLMVSMYAEPTKSEIIALAESAMNELSKIALEGQPLWVPQKDKRFETINDIEYLRKFGEVHEIESLREIMKLVEVGNDTFSSSQYLLPVVDSFQRELVPSSLSGVPKEALQTEASRDMAYLEISSTKLLHLLMDANEWSKEFDNIVARAAVLGTLSNGAEESYDGKVQVMYAEYHLPTPFVASRECYFARYCKQLPYEMWGVVDVSLEKYFPSLATNFRRRPSGCLIKPMPDGFSKIIWVEHVEADHSQLSNHFRPLVTTGLAFGATRWINSIIRHIDSSQIMEATTAPIYVDHGVVIPQAGRKSFLNLADRLVRSFCGDINASMANQWMPLITSESDSSDVRVMIKNNIEDPGKPIATTVVFSTCLWLKVSPSRLFNFLRHEDSRNKWDLLSRKLTIREFAYMNKGINTGNRVSLMRAMNSQDKIEIFYIQESYTDSTGSHIVYAPLDEFALSALANGANPDKVIVLPSGFSILPCGFPSDYYGEDGGSGCILTIAFHIIESHNVRLFVPPESVMTMKKIISDTVINIRDAVMYNNHTNNWHYN 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc885g00002 667 Gene3D - 232 404 IPR023393 -
Stsc885g00002 667 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 93 655 IPR042160 -
Stsc885g00002 667 SUPERFAMILY Bet v1-like 423 655 - -
Stsc885g00002 667 Pfam START domain 223 393 IPR002913 GO:0008289
Stsc885g00002 667 CDD START_ArGLABRA2_like 134 399 - -
Stsc885g00002 667 SMART START_1 190 401 IPR002913 GO:0008289
Stsc885g00002 667 ProSiteProfiles START domain profile. 130 404 IPR002913 GO:0008289
Stsc885g00002 667 SUPERFAMILY Bet v1-like 134 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc885g00002 Stsc-Chr885 16910 20945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc885g00002 94 598 Homeobox Transcription Factor Family AT4G21750 40.117 7.75e-119 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc885g00002 K09338 - jre:108992281 510.375