Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc882g00003 ATGGAAATAGGGCCTCGTGCTCCAATCTCTGAATCTGATGAGGATGAGAATGGCGGAGGAAATCGGAATGAGAAGCGGCGAAGGAGGAGGAGGACACAGTCACAGACACAACCACAACCACAACCGCATTCAATCTCAGTTCACCGCCGTTTTCCTTCCTCTTCCGCTGGCTTCGATTACAGGATGGATGAAGAAAGCTTGCACATAATTCCTGGCAGGCTCTTTCTCAATGGTTCCACCCACTTTGGCTCCTTGTATTGTAAGCAAGGTAGAAAAGGCCACAACCAAGATGCTATGCTTCTTTGGGAGAAAGTTTGCTCAAAAGAGGACACCATCTTTTGTGGTGTGTTTGATGGGCATGGACCTCATGGGCATAAGGTTTCAAAGAAAGTGAGGAATTCCTTCCCTCTAATCCTTATGGCTGAATGGGATTTGCATCTTAATAACAATAAAGATAGACTCTGCAGCAGTTCCGCAGCTGAAGAGAAACCTAACCAAGAGAGCCCTGACACGGCTGCTTTCGCGGCAGTTACAGAATCTTACGTGAGGGCTTGTAAGGTGATGGACAACGAACTCAGGATGCAGAGTGAATTTGACTCCTTTTGCAGTGGGACTACAGCAGTTACCTTGGTTAGGCAGGGACAGCACCTAGTTATCGGAAATGTTGGGGACTCGAGAGCTGTGTTGTGTACCCGAGATCACAATGACTCTCTTATTCCTGTTCAGTTGACTACTGACTTTAAGCCTAGTCTTCCAAGGGAAGCAGAGAGGATAAGGCTTTACAAGGGAAGGATATTTGGCCTTCCGCATGAGCCGGAGATAGCTCGAGTATGGCTGCCTAACATTGATTCCCCAGGGCTTGCTATGTCGCGAGCTTTTGGAGATTATTGCCTGAAGGACTTCGGCGTCATCTCTCTTCCTGATGTCTCCTATCATCACATCTCTGACAAGGATGAATTTGTTGTATTAGCCACTGATGGGATTTGGGATGTGTTATCAAACAGAGAAGTACTGGGCATTGTGGGCAGCGTGCCGCGATCGTGTGCAGCTCGAATAGTCGTGGACTCGGCTGTTCATGCATGGAGGACTAAGTTCCCCGCTGCCAAGATTGACGATTGTTCTGTCGTGTGCCTCTTCTTTGATTCAGATTCAGATCAGTGTAAGTCACCATCCGCTGCAGAAGACATGATGATGATGATGGATGAGCAATCTGAAGTTGGGACTATATTATCTGTAACTAACACTGTAGTTGGCCCAACCATCCTTGAAACAAGGAACCAACACCGCCGCTAA 1293 0.4756 MEIGPRAPISESDEDENGGGNRNEKRRRRRRTQSQTQPQPQPHSISVHRRFPSSSAGFDYRMDEESLHIIPGRLFLNGSTHFGSLYCKQGRKGHNQDAMLLWEKVCSKEDTIFCGVFDGHGPHGHKVSKKVRNSFPLILMAEWDLHLNNNKDRLCSSSAAEEKPNQESPDTAAFAAVTESYVRACKVMDNELRMQSEFDSFCSGTTAVTLVRQGQHLVIGNVGDSRAVLCTRDHNDSLIPVQLTTDFKPSLPREAERIRLYKGRIFGLPHEPEIARVWLPNIDSPGLAMSRAFGDYCLKDFGVISLPDVSYHHISDKDEFVVLATDGIWDVLSNREVLGIVGSVPRSCAARIVVDSAVHAWRTKFPAAKIDDCSVVCLFFDSDSDQCKSPSAAEDMMMMMDEQSEVGTILSVTNTVVGPTILETRNQHRR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc882g00003 430 MobiDBLite consensus disorder prediction 7 23 - -
Stsc882g00003 430 CDD PP2Cc 82 380 IPR001932 -
Stsc882g00003 430 SMART PP2C_4 71 378 IPR001932 -
Stsc882g00003 430 MobiDBLite consensus disorder prediction 34 51 - -
Stsc882g00003 430 Pfam Protein phosphatase 2C 89 342 IPR001932 -
Stsc882g00003 430 SUPERFAMILY PP2C-like 81 381 IPR036457 -
Stsc882g00003 430 Gene3D - 79 382 IPR036457 -
Stsc882g00003 430 PANTHER PROTEIN PHOSPHATASE 37 378 IPR015655 GO:0004722|GO:0006470
Stsc882g00003 430 ProSiteProfiles PPM-type phosphatase domain profile. 82 380 IPR001932 -
Stsc882g00003 430 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc882g00003 Stsc-Chr882 11176 13327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc882g00003 48 393 PP2C-type Phosphatase Gene Family AT3G02750 47.573 5.91e-124 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc882g00003 - - gmx:100802479 454.136