Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc86g00005 ATGGGGTTTTTGTTGAAGGAAGCTCTCAAGACTCTCTGTGCTCGGAACCAATGGTCTTATGCTGTGTTCTGGAAGATCGGATGTAATAATTCCAAGCTGTTGATCTGGGAAGATTGCTACTACGAACCCTTGCTGGCTCCTTTCCCGGCAAGCGTTTCCGGGGTGTCTAATTTGCCTTACCAAGATGGGGACGGAGGGTGGTTTTCTTCGGAGTCTCAGTGGTCGCAGCTGGGGATTAAGGAAGAGGACAGAGTCTGTTCTTTGATTAACAAAATGATGGTGAATAATTCGGTCAATATAGCTGGTGAAGGGATAATTGGACGGGCAGCATTTACAGGAAACTACCAGTGGATTCTTTTGAACAATTTAACAAGAAATGCATATCCACCAGAGGTGTATACTGAGGTTCATCAGCAATTCTCAGCCGGAATTCAGACAATAGTGGTTATTCCTGTCCTTCCACATGGTGTCGTTCAACTTGGTTCTTTTTTACCAATAATGGAAAACATTGGATTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTGGGATGTGTTCCTGGTGCCCTTTTATCTGATGACTACTCAGTAAAACATTCAACCGAAAGTCTTACTAGACCTGCTAATGTTGATCCACCCGTACCTACCCCAAACTGCCCTCCTTTGGTAGCCGGTGGCTCAAACCAAGCAAGTTATTCATCTCATATTCCAAAGCCTATTGTTCAACCCATAAATAATTACCAAGGTTCCATATTGACGCCTCAAAGCCGTAACATAAACCAGATATCATCCTCAATAACCGAAACAACTGTCAGGGGCCAACAAGAGAATATGGTTGTGAAGGCTGAAGCTGAATTGATGCCGTCAAATTTCGATTCATGCATTCAAAAGCAATCCGTTTCTTATAATACAAGATCTGCATACAATGATTTAACCAGTTTCGGCCAACCATGTCTCAGTGATTGCAGCCTTAAATACATGGAACAACAAATCTTATCTGGAGTTGGGAGACAAAGCCATGTTAGTCCTAATATGAACACATCAAGGAGCTTTAATATGGCTCAACCGAAAACAAATAGCAGCATCTGTATTCTTGGACATGTCCAGAGTTCTGCAAATACATCCGTGCTTGGAGGAGTCCCAACATCTGGTGGGATGACTAATCTTGGACCGGTTTCAAACCTTTCTAAACTGTCCACTGCAGAGTTTTCTATACCACAAAATGTTGGGGTTGGACTTCAAAATGGTAGATCAACTAGAGCCAGCATGCATTCTGTGTCGAGTTTGACCAACCAATCAGTAACCAGTCACATGCCTTCAGAAGGTTCTGATCAGAAGAATGTTGATTTAAAGCGTGCGTATGATGCACTGGCCTCGTTGGATCAAGGGGTAGATGATGTGATGCTTCAGGACCTTAAAATCCCATCTGTTCATCTTGAGGAGCATGTATCCATGAATGATCACATCTCAGGGTTTGTTGGTGATTGTCTCATTAAGGATGCTAATAATCAACATATGATGAGAAATGCTAAACATGAAGAAGTTTGCACTCGACCTCCATCGAGTGATGACCTCTTTGATGTTTTAGGTGAAGATTTCAAAATGAAACTGCTAAATGGAAATTGGAATAAGTTGTTTGCTGATGAACCAGATGGTGATGCTGAAAGTCTGGATAACAAGACAACATATATGAATATGCAGGGAGCTCCACCACTTCTTAATAGTTCGATAAGCGAAACAATATCAAGCAGTGATATCATCTCTGGGACATGCACTGACAACCTCTTAGATGCGGTGGTCTCAAAGGCTCAATCTGCTTCTGCCGTGAAACAAAACTCTGATGACATGTCATGCAGGACAACAGTGACAAGGACTAGTACCTCCTCAACTCCCTCTCCGGCTGGCAAACAAGTTTTGTTTGATGTTCCCAAGACGGGGGACAAGATAGGCTCGGCCGAAACTAGTTCCGTTAGGTCTGGTTGTGGCAAGGCTAGTGCTGGAAACTCTGCTCAGACAACTTCCATCTATGGGTCTCAACTTAGTTCCTGGATTGAGAATGGGAGCCGTGTGAAGCGTGAAAACAGTGTTTCAACTGGATACTCTAAGCGGCCGGATGAAGGTAAATCGAACCGTAAAAGGCTCAAGCCTGGAGAGAATCCCCGCCCTCGACCCAAAGATCGCCAAATGATTCAGGATCGTGTGAAAGAGTTGCGCGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATTCACTCTTGGAAAGGACTATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACTGGGGAATCTAAGATTATTAGCAAGGAAGGTGGATTGCTCTTGAGAGATAACTTCGAGGGAGGAGCGACATGGGCATATGAGGTTGGTTCACAGTCAATGGTTTGCCCTATCATAGTTGAGGATTTGAGTCCCCCGCGACAGATGCTAGTTGAGATGCTTTGCGAGGAGCGCGGTTCCTTTCTCGAAATAGCCGACTTAATCAGAGGATTAGGCTTAACCATCCTAAAGGGTGTCATGGAAACTCGCAACGACAAGATTTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTCATGTCGCTGGTTCGTCTTTTAGAGCAAACAGTGAAGGGAAATGCATCTTCATCCAATGCAGTTGACAACAACATGATGGCTTATCATTCTTTCCCACTAGCTACCCAGATACCGGCAACCGGTATGCCTGCTAGTTTGCAATGA 2784 0.4389 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLLAPFPASVSGVSNLPYQDGDGGWFSSESQWSQLGIKEEDRVCSLINKMMVNNSVNIAGEGIIGRAAFTGNYQWILLNNLTRNAYPPEVYTEVHQQFSAGIQTIVVIPVLPHGVVQLGSFLPIMENIGFVNDVKSLILQLGCVPGALLSDDYSVKHSTESLTRPANVDPPVPTPNCPPLVAGGSNQASYSSHIPKPIVQPINNYQGSILTPQSRNINQISSSITETTVRGQQENMVVKAEAELMPSNFDSCIQKQSVSYNTRSAYNDLTSFGQPCLSDCSLKYMEQQILSGVGRQSHVSPNMNTSRSFNMAQPKTNSSICILGHVQSSANTSVLGGVPTSGGMTNLGPVSNLSKLSTAEFSIPQNVGVGLQNGRSTRASMHSVSSLTNQSVTSHMPSEGSDQKNVDLKRAYDALASLDQGVDDVMLQDLKIPSVHLEEHVSMNDHISGFVGDCLIKDANNQHMMRNAKHEEVCTRPPSSDDLFDVLGEDFKMKLLNGNWNKLFADEPDGDAESLDNKTTYMNMQGAPPLLNSSISETISSSDIISGTCTDNLLDAVVSKAQSASAVKQNSDDMSCRTTVTRTSTSSTPSPAGKQVLFDVPKTGDKIGSAETSSVRSGCGKASAGNSAQTTSIYGSQLSSWIENGSRVKRENSVSTGYSKRPDEGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDSLLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLRDNFEGGATWAYEVGSQSMVCPIIVEDLSPPRQMLVEMLCEERGSFLEIADLIRGLGLTILKGVMETRNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNAVDNNMMAYHSFPLATQIPATGMPASLQ 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc86g00005 927 MobiDBLite consensus disorder prediction 696 729 - -
Stsc86g00005 927 MobiDBLite consensus disorder prediction 687 729 - -
Stsc86g00005 927 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Stsc86g00005 927 MobiDBLite consensus disorder prediction 649 671 - -
Stsc86g00005 927 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 921 IPR043561 GO:0003700|GO:0006355
Stsc86g00005 927 MobiDBLite consensus disorder prediction 645 671 - -
Stsc86g00005 927 CDD bHLH_AtLHW_like 718 787 - -
Stsc86g00005 927 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 714 763 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc86g00005 Stsc-Chr86 51798 57898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc86g00005 518 902 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.962 5.07e-115 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc86g00005 - - aip:107629784 1469.14