Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc85g00016 ATGGCTAGTGATGAGTTACCAATGATGATGTTGGGAAAGGGAAAGGATGCAGAAGAAGAATATGATGAAACCCTGAATTCGAAATTGCAAAAATTCTTATCCAGGACAGAAAGTTCAATTGCAATTCCAGTGCCAGTGAGGTCCACAGAAACTAGTGTTGCTGGACACTCACACACTGGTCCACTGCTGATGCAGAGTATGGCTTTCAGATTGGCTTATGTTTCTCCTGAGACAAGGGTGGTTGGTACTGGAGATTTAGAGGACCATCCAAAGAAAATCGCACTTCATTACCTTGGGGGTTATTTTTTTCTTGACTTATTTGCTGTCCTGCCTCTTCCTCAGATAATGGTATTGTTTGTCCTGCCCAAATCCTTTGGGGGAGCAAATTATGCTAAGAATCTTCTGCGTGCGGTGATCCTTGTGCAGTACATCCCCAGATTGTGTAGATTTTTGCCTATGCTAATTGGCCAGTCTCCATCAGGATTTGTATTTGAGTCAGCCTGGGCGAATTTTATAATAAACCTTTTAATTTTTATGCTGTCTGGACACGTTGTTGGCGCTTGCTGGTATCTCTTTGGTCTTCAGAGGGTTAACCAATGTTTGAGAGATGCCTGCCATAATTCTAATATCCCCGGATGCATGGCATTCATTGACTGTGGGCATGGACAGCCTTACCAAACATCAAATGAGTAG 693 0.43 MASDELPMMMLGKGKDAEEEYDETLNSKLQKFLSRTESSIAIPVPVRSTETSVAGHSHTGPLLMQSMAFRLAYVSPETRVVGTGDLEDHPKKIALHYLGGYFFLDLFAVLPLPQIMVLFVLPKSFGGANYAKNLLRAVILVQYIPRLCRFLPMLIGQSPSGFVFESAWANFIINLLIFMLSGHVVGACWYLFGLQRVNQCLRDACHNSNIPGCMAFIDCGHGQPYQTSNE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc85g00016 230 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 67 225 - -
Stsc85g00016 230 SUPERFAMILY Voltage-gated potassium channels 92 195 - -
Stsc85g00016 230 Pfam Ion transport protein 85 204 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc85g00016 Stsc-Chr85 74746 75732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc85g00016 67 223 Ion Channels AT3G17700 67.925 3.29e-72 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc85g00016 K05391 - gmx:100795427 275.018