Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc85g00015 ATGGCCATTATAGGATCTGGACTGTTGCTTTTCGCTATTCTCATTGGAAACATACAGAATTTTCTTCAAGCTCTTGGGAGGATGTACAAGAGGCAAGAAATGCAACTCAGAGGCCGTGATGTGGAGCAATGGATGAGCCATCGACGCTTGCCAGAAAATCTAAGAAGGAGAGTGCGGGAGGCTGAACACTATTCTTGGGCTGCAACAAGGGGAGTGAACGAAGAAATGCTTATGGAAAATTTACCAGAAGATCTACAGAGAGACATAAGGCGTCATCTCTTCAAATTTATTAAGAAAGTTCGGATTTTTGCCTTGATGGATGAACCTATCCTAGATGCCATTTGTGAGAGATTAAGACAAAGGACATACATAAAAGGAAGCAAAATATTGAGTATGGGTGGTCTAGTAGATAAGATGGTATTCGTGGTGCGAGGAAAGCTCGAGAGCGTAGGAGAAGATGGAATATGA 468 0.4231 MAIIGSGLLLFAILIGNIQNFLQALGRMYKRQEMQLRGRDVEQWMSHRRLPENLRRRVREAEHYSWAATRGVNEEMLMENLPEDLQRDIRRHLFKFIKKVRIFALMDEPILDAICERLRQRTYIKGSKILSMGGLVDKMVFVVRGKLESVGEDGI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc85g00015 155 CDD CAP_ED 102 154 IPR000595 -
Stsc85g00015 155 SUPERFAMILY cAMP-binding domain-like 30 151 IPR018490 -
Stsc85g00015 155 Gene3D Jelly Rolls 100 155 IPR014710 -
Stsc85g00015 155 Gene3D Helix hairpin bin 29 94 - -
Stsc85g00015 155 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 150 - -
Stsc85g00015 155 FunFam Cyclic nucleotide-gated ion channel 1 30 94 - -
Stsc85g00015 155 ProSiteProfiles cAMP/cGMP binding motif profile. 102 155 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc85g00015 Stsc-Chr85 73746 74454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc85g00015 17 154 Ion Channels AT3G17700 75.362 4.33e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc85g00015 K05391 - gmx:100781973 270.396