Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc85g00013 ATGGCCAGAACTAAGAGAAAATCTCTGCTTTCTGCTCTGGAAAAGATCCAACAAGAATTAATGCTATTTGGGCTTCTGTCATTGCTAATGGGTCATTGGATTATCTTTGTGGCAAAGATTTGTGTCAAAACATCAGCATTAAGCAGCAGGTTCTTCCCTTGTGCAGTTAAAGACACTTCTGGAAAAGTAGTGCAGCACAATATTTTCGGGTATTCTTCTCACCACAATAACTCAGTTTTCAAAGAGAAACTCCACATTGGCCTCCATAATTATTGTCCTGAGGGACATGAATCATTGGCTTCTTATGAGAGCCTTGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGCAATCACACATGTTAGCTATAGCTTTGTTGCTGTTGCCTTGGCCATGATCAAGATATATAGCTGGAGAGCATGGGAGAATGAAGCAAAGACCATGGCCTTACAACAAAGCTTGCAAGGTACTCCACAAAATACAACAAGCATGAGATTGAACCGGGTTACAACGTTTGTCTCTCACCGAACTTCCCACCCATGGAGTGATCACAAAGTTCTTGTTTGGCTGCTATGCTTCAGCCGCCAATTCTGGAGTTCTATCAACCGTGCAGATTACATGGCATTGCGTTTAGGCTTCATTACTACTCATGAGCTTCCCCTGACGTATGATTTCCACAACTATATGCTTCGAAGCATGGATGATGAATTTCGTGACATCGTTGGTGTTAGTTTGGTTCTCTGGATATATGCCATATGCTGCATATTTCTAAATTTTCATGGAAGCAACTTTTACTTTTGGCTTTCCTTTGTTCCATCAATTTTGATACTGATAATTGGTACTAAATTGCACCGAGTGGTGGTAAAGTTGGCCATTGAGATAGTAGATCATTGGCCAAATGTTAAGCCCCAACAGTTTAACTTGAGAGATGAGCTGTTTTGGTTTGGAAAGCCAAGGTTCTTGTTGCGCTTAATACATTTGATATCCTTCTTGAATGCGTTTGAGATGGCATCATTCTTATGGTCCTTGTGGGAAATCAAAGAACCTTCTTGTTTCATCAACAACAAAACCTTTGTTGTGATCCGCTTATCATTCGGGGTAGTGTCACAAGTGTGGTGCAGCTTTATAACGTTTCCTCTATATGTTATCATCACACAGATGGGGTCAAGGTTCAAGAAGTCAGTGGTGTCAGAGAATGTGAGAAAATCACTTTCTAAATGGCAGAGAAGAGTGAAGGACAAACAAAGTTCCCCTCAAGCACTGGTTTCTGCAACATCACCATTATCAGATTCTGTTAAGAACAATGCAATGGATAAGTTAATGAGTGGGGAGGGAAGCTCCTCTGGAACTAAAAATGATTATTACTCTCATTCTGATATGGATGACGATGATGATTCATATTCCCCTCCACTTCCTTGA 1416 0.4075 MARTKRKSLLSALEKIQQELMLFGLLSLLMGHWIIFVAKICVKTSALSSRFFPCAVKDTSGKVVQHNIFGYSSHHNNSVFKEKLHIGLHNYCPEGHESLASYESLEQLHRFVFVLAITHVSYSFVAVALAMIKIYSWRAWENEAKTMALQQSLQGTPQNTTSMRLNRVTTFVSHRTSHPWSDHKVLVWLLCFSRQFWSSINRADYMALRLGFITTHELPLTYDFHNYMLRSMDDEFRDIVGVSLVLWIYAICCIFLNFHGSNFYFWLSFVPSILILIIGTKLHRVVVKLAIEIVDHWPNVKPQQFNLRDELFWFGKPRFLLRLIHLISFLNAFEMASFLWSLWEIKEPSCFINNKTFVVIRLSFGVVSQVWCSFITFPLYVIITQMGSRFKKSVVSENVRKSLSKWQRRVKDKQSSPQALVSATSPLSDSVKNNAMDKLMSGEGSSSGTKNDYYSHSDMDDDDDSYSPPLP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc85g00013 471 MobiDBLite consensus disorder prediction 413 453 - -
Stsc85g00013 471 PANTHER MLO-LIKE PROTEIN 1 3 433 IPR004326 GO:0006952|GO:0016020
Stsc85g00013 471 Pfam Mlo family 2 425 IPR004326 GO:0006952|GO:0016020
Stsc85g00013 471 MobiDBLite consensus disorder prediction 411 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc85g00013 Stsc-Chr85 70453 73090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc85g00013 1 470 MLO family AT1G11000 44.311 1.71e-135 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc85g00013 K08472 - gmx:100807014 693.73