Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc85g00012 ATGGCTCTTCTACTTGCACCTCGTTGGTTCCTGTCTCTTGTTCTTCTCCTTCATTTTCTGTTCTCTTGTTCAGGATCAAATGTTGTCACCGTTAATGTTGCTGCTGCCAAGGGCCTTATTCACACCGGCTACCTTTATCTCGATGTCAGAACTGTGCAAGAGTTTAGAAAAGGCCATGTAGATGCTGCTAACATTATTAACATTCCATACATGCTGGACACACCCAACGGTAGGGTGAAGAATCCAGACTTTTTAAAAGAGGTTTCATCTGTTTGCAATAAACAAGATCATCTCATTGTGGGTTGCCAAAGTGGAGTGAGATCTCTGTATGCAACTACTGATCTTGTTGCTGATGGGTATAAGAATGTGAAGGACATGGGAGGGGGTTACATGGAATGGCTCAAAAGCAAGTTTCCAGTCAAATCATCATTACAGAAAGAGGAGGAGCTCTAA 453 0.426 MALLLAPRWFLSLVLLLHFLFSCSGSNVVTVNVAAAKGLIHTGYLYLDVRTVQEFRKGHVDAANIINIPYMLDTPNGRVKNPDFLKEVSSVCNKQDHLIVGCQSGVRSLYATTDLVADGYKNVKDMGGGYMEWLKSKFPVKSSLQKEEEL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc85g00012 150 Pfam Rhodanese-like domain 45 135 IPR001763 -
Stsc85g00012 150 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Stsc85g00012 150 Gene3D - 21 142 IPR036873 -
Stsc85g00012 150 ProSiteProfiles Rhodanese domain profile. 40 142 IPR001763 -
Stsc85g00012 150 PANTHER THIOSULFATE SULFURTRANSFERASE 18 24 149 IPR044684 GO:0003824
Stsc85g00012 150 SMART rhod_4 31 139 IPR001763 -
Stsc85g00012 150 CDD RHOD 43 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc85g00012 Stsc-Chr85 68676 69672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc85g00012 22 149 Sulfurtransferasese or Rhodanese AT5G66170 56.250 3.97e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc85g00012 - K15692 aip:107642568 259.61