Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc85g00011 ATGTTGTCATTTGCCAGGTTTGCAGTTGGAGGAGGAGGAAAATGGATTGGACTAGTGACAGCAATATGGGTTCAAGCAGTATGCGGAAACAACTACACCTTCTCCAACTACTCTCATGTTTTGAAGTCCCTAATGTCTCTAACACAGATGCAGCTCAACAATCTCTCTGTTGCTAAGGATTTTGGCAAGGCTTTTGGTCTTCTCTCTGGTCTTGCCTCTCATCACTTCTCCACTTCACTTCTACTCATCATTGGAGCCACCTTGGGATTCATAGGCTATGGTGTTCAATTCCTTGTTGTTACCCAAACTATTCCTCCACTCCCTTATTGGCTTATGTGTATATTCTTGTGTATGGGGGGAAACAGCACTACATGGATGAACACTGCAGTTCTTGTGACTTGTATGAGGAACTTTCCAACCAATAGAGGCCCAATTTCTGGAATTCTCAAGGGTTATGTGGGACTTAGCACTGCAATCTTCACTGACATATGTTCTGCTTTGTTCTCCTCAGATCCTTCCAAGTTTCTGCTAATGCTTACCATTGTTCCTGCCACCGTTTGCTGCATTGCTGCTGTTTTCCTCCGCGAAACGCCGCCGGCTTCCACTTGTGTTCAAGAGAATAAAGAAGCTCAATTCCTCAACACATTCAACTTGATTGCTGTTATGGTAGCTGTTTACCTTTTAGCATTTGATGTTAGTGGAATTCATGGCCATGTTCTTTCCTTGATTTTCACAGCAGGGCTTCTTATCCTGTTGCTCATGCCTCTTCTTGTTCCTTTGTATCTGATCATCTTCAATAATAATAATCCAAGTCCTGATGTAGACCAAGAACAGCAACAGATTCATGAAGCTTTGCTTGATGAGGACAAGAAGGTGGAGGAAGTTGAAATAAAAAAAGGAAAGGCTTTTATAGGGGAGGAGCATAGCATAGCACTTGGTTACTCTGATGTCTCAATCTTCATCTCCTTCACTAGCATATGGGGTTTCTTTGGCCGCATTCTTTCTGGCTCACTCTCAGAACACTACATCAGAAAATCAGGGATGCCAAGGGTAGTTTGGAATGCAGGTGCACAAATCCTTATGAGTATGGGTTACATTGCATTGGCTATGGCATTGCCAGGGTCACTTTACATAGGTTCAATGGTAGTGGGAATATGCTATGGAGTGTACTTTACAATAACACCAGCAGCAGCTTCAGAGTTATTTGGGTTAAAATACTATGGTATAGTATACAACATTTTGATTCTTAACCTTCCAATTGGGTCATTCATCTTCTCTGGCCTAATTGCTGGGTACCTATATGATGTTGAAGCCAAAAGTGTGGGTGGTGAGGGAAATACCTGCATTGGTGCACATTGTTATAGGCTTGTTTATGTGATTATGGCTTTTGCTTCTCTTTTGGGGTGTGGATTGGACGTGCTGCTTGCTCTTAGAACAAGAAATGTTTATTACAAGATCTACCAACAAAGAACAACACTTTCCAATTCAATTAAATAG 1497 0.4188 MLSFARFAVGGGGKWIGLVTAIWVQAVCGNNYTFSNYSHVLKSLMSLTQMQLNNLSVAKDFGKAFGLLSGLASHHFSTSLLLIIGATLGFIGYGVQFLVVTQTIPPLPYWLMCIFLCMGGNSTTWMNTAVLVTCMRNFPTNRGPISGILKGYVGLSTAIFTDICSALFSSDPSKFLLMLTIVPATVCCIAAVFLRETPPASTCVQENKEAQFLNTFNLIAVMVAVYLLAFDVSGIHGHVLSLIFTAGLLILLLMPLLVPLYLIIFNNNNPSPDVDQEQQQIHEALLDEDKKVEEVEIKKGKAFIGEEHSIALGYSDVSIFISFTSIWGFFGRILSGSLSEHYIRKSGMPRVVWNAGAQILMSMGYIALAMALPGSLYIGSMVVGICYGVYFTITPAAASELFGLKYYGIVYNILILNLPIGSFIFSGLIAGYLYDVEAKSVGGEGNTCIGAHCYRLVYVIMAFASLLGCGLDVLLALRTRNVYYKIYQQRTTLSNSIK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc85g00011 498 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 290 - -
Stsc85g00011 498 CDD MFS_Mch1p_like 13 469 - -
Stsc85g00011 498 Pfam Nodulin-like 14 260 IPR010658 -
Stsc85g00011 498 SUPERFAMILY MFS general substrate transporter 27 481 IPR036259 -
Stsc85g00011 498 Gene3D MFS general substrate transporter like domains 301 482 IPR036259 -
Stsc85g00011 498 Gene3D MFS general substrate transporter like domains 14 209 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc85g00011 Stsc-Chr85 64518 66786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc85g00011 14 492 Nodulin-like Gene Family AT4G34950 54.113 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc85g00011 - - rcu:8260661 616.305