Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc85g00004 ATGATTTCATCTGCATCATTTACTGCCTCTCTCTCCGCCGCTAAATTCGCCGGCGGCTCCGTCGCTCCGCCTCCTAGTCGCGTCAGATCCCGCCCGATTGTGTCGTTCGCCACCGCTACAGCCACCGCAGAAGCTCGCTCTACCTGGACGGACCAAAGGAGGCCTTCGTTTCTGAACCCCGACGCGGTATTCCCTTCCTGCACTTCACTCTATGAGATTCTTGGTATTCCCGCCGGTGCCTCCAGCCAGGAGATCAAGGCGGCATACCGGCGACTCGCTAGAGTCTGCCACCCGGACGTGGCTGCAATTGACCGGAAGAATTCGTCGGCGGACGAGTTTATGAAGATTCACGATGCTTACTGTACCCTGTCGGATCCTGACAAGCGCGCCAATTATGATCGGAGCCTGTTCGGGTCGCGGCAACGGCCGCTGTCGACGGCGTCCGTATTTTCTGGCTACAGCGGGCGGAACTGGGAAACGGACCAGTGCTGGTAG 495 0.5899 MISSASFTASLSAAKFAGGSVAPPPSRVRSRPIVSFATATATAEARSTWTDQRRPSFLNPDAVFPSCTSLYEILGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHDAYCTLSDPDKRANYDRSLFGSRQRPLSTASVFSGYSGRNWETDQCW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc85g00004 164 Pfam DnaJ domain 70 133 IPR001623 -
Stsc85g00004 164 PRINTS DnaJ domain signature 71 89 IPR001623 -
Stsc85g00004 164 PRINTS DnaJ domain signature 108 128 IPR001623 -
Stsc85g00004 164 PRINTS DnaJ domain signature 89 104 IPR001623 -
Stsc85g00004 164 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Stsc85g00004 164 SMART dnaj_3 68 128 IPR001623 -
Stsc85g00004 164 Gene3D DnaJ domain 59 151 IPR036869 -
Stsc85g00004 164 CDD DnaJ 71 125 IPR001623 -
Stsc85g00004 164 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 25 148 - -
Stsc85g00004 164 SUPERFAMILY Chaperone J-domain 41 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc85g00004 Stsc-Chr85 25500 26239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc85g00004 71 133 C2H2 Transcription Factor Family AT1G74250 43.284 2.66e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc85g00004 - - aip:107642575 281.952