Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc84g00014 ATGCAGCTTTCCAGGTCCAACCAGGAGGCACTTTCTTACACCGGCATTCATCTCTCCCACGTTCCCAATGGTGGAAAGAATAGTGCCGATAGAACTCTTCTTGTTGATCTTATGTGTTGGGTTTCTCAAAACCCACCACCTGCACATCTCTTTCTGATTTCTGGGGATAAAGACTTTGCTGGCATATTGCACCGTTTAAGAATGAATAATTACAACATCCTGCTTGCAACCCCCGGATCAGCTCCTGATGTGCTATGCGCTGCAGCAACTATAATGTGGCAATGGCCATCTTTGCTTAAGGGAGAAGATGTTATTGGAAAGCATTTCAATCATCCTCCAGATGGCTCTTTTGGATCTTGGTATGGAAATTATAAGGTGCCTCTTGAAAATCCCTTCTCAGCTAGTGAACAGTCTGCATCTTATCAAAAAGCAGAAAGCTGTGAATCTTCCCCAATTCCAAAGTCAGTAGTAAGGCAGGTTAGGCGTATATTGAATTCACATCCAAAAGGGATGTCCATTGCAGATTTTCGTGCGGAGTTAACAAAAAGTAATGTGCATTTGGATAAATCCTTCTATGGACTGAAAAAGTTGTCCAGTTTTCTTCTATCAATACCACATGTACAACTCAAGCATTTTGGTGCTGGTGTTTATTATGTGCGTTTGTCTCCCTTAGAGTTTCCCAACCCACCAAAAACACCTGCTGTTGGGTATAAAACAACTCAAAAGTTGAATGGTGAGAGTAAAACTGTGCCTAGAGATGCAGATAGGACATCTTCAACGCCCTCATTGCATGAAAGCAGTAGTGAGAAGATTGAGAATATGACTGAAGCACAATTGTCTGACGTTAAACTGCCACCAAATGACAAGGAAGTTTCACAATCTAAGGAAGATAATGAGATTGTCAGGTCTGATGAGGTAAGTCTCAATAAATCTGGAAAACCTACTTTATCAGATAACCACTCTTCTCAGAACACATTGGTGGAAAACAATCTTGTTGATGATGAATCTGGAAAATATAAAGCTGAGTACAAAAATGAGGGTCCAACTAGAGGGGATGCTGATGAGGTTTGTCAAAGCTCTTATTCTGTGCCAGTTGATGACTCTATGATTGACAAAAGGCATGATGGGAGTTCTGAAACTCATAGAAAGAGTCCAACATTTGGTTGGATTAGAAGTTGGTTTCCATTTTGGAAAAGCAATGCTAAATCTGATGATTTAACGACTAATAATACCAGCATGGATAGTCACTCTGAGGAGCCCAAGTTATCTCAACCGGACATGGCGGTGAGTCACTCTGAGGAACCCAAGCTATCTCAACTGGACATGGCAGTGAGTCATTCTGAGGAACCCAAGCTATCTAAACAGGACATGGCTGTAAGTCATTCTGAGGAGCCCAAGCTATCTCAAGCGGACCAGACTGTAAATCATTCTGAGGAGTCCAAGCTATCTGAACAGAACCAGATTGTTGTTCATGCTGAAGAGCCAAAAATATCAGATCAGCCACCCAAGTTACCTGAGCTGAACCAGACTGTTAGTCATTCTGAAGAGACCAAATTATGTGATCTGGACCAGACTGTTTCTCAGTCAGTAGAGCCCAACACATCTGAAATTAACTGGATTGTTGGTCATTCTGAAAAGCCTGAGTTATTTTTTAGAGATTCCTTTTGGGATCTCTTGGAATCTTATGTTTTTACCACCCAAGGATCAGTCCTCGTCTCCCTGTCAACAAGCAGGTTGTTATGCATGATAGTTTTATAA 1758 0.4158 MQLSRSNQEALSYTGIHLSHVPNGGKNSADRTLLVDLMCWVSQNPPPAHLFLISGDKDFAGILHRLRMNNYNILLATPGSAPDVLCAAATIMWQWPSLLKGEDVIGKHFNHPPDGSFGSWYGNYKVPLENPFSASEQSASYQKAESCESSPIPKSVVRQVRRILNSHPKGMSIADFRAELTKSNVHLDKSFYGLKKLSSFLLSIPHVQLKHFGAGVYYVRLSPLEFPNPPKTPAVGYKTTQKLNGESKTVPRDADRTSSTPSLHESSSEKIENMTEAQLSDVKLPPNDKEVSQSKEDNEIVRSDEVSLNKSGKPTLSDNHSSQNTLVENNLVDDESGKYKAEYKNEGPTRGDADEVCQSSYSVPVDDSMIDKRHDGSSETHRKSPTFGWIRSWFPFWKSNAKSDDLTTNNTSMDSHSEEPKLSQPDMAVSHSEEPKLSQLDMAVSHSEEPKLSKQDMAVSHSEEPKLSQADQTVNHSEESKLSEQNQIVVHAEEPKISDQPPKLPELNQTVSHSEETKLCDLDQTVSQSVEPNTSEINWIVGHSEKPELFFRDSFWDLLESYVFTTQGSVLVSLSTSRLLCMIVL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc84g00014 585 MobiDBLite consensus disorder prediction 254 275 - -
Stsc84g00014 585 PANTHER LIMKAIN B LKAP 2 418 IPR024768 GO:0005777|GO:0010468
Stsc84g00014 585 MobiDBLite consensus disorder prediction 367 381 - -
Stsc84g00014 585 Pfam NYN domain 8 89 IPR021139 GO:0004540
Stsc84g00014 585 CDD PIN_limkain_b1_N_like 2 78 - -
Stsc84g00014 585 CDD LOTUS 153 207 - -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 403 486 - -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 447 461 - -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 288 306 - -
Stsc84g00014 585 Pfam OST-HTH/LOTUS domain 154 218 IPR025605 -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 228 384 - -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 403 418 - -
Stsc84g00014 585 ProSiteProfiles OST-type HTH domain profile. 152 223 IPR025605 -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 465 486 - -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 308 331 - -
Stsc84g00014 585 MobiDBLite consensus disorder prediction 333 351 - -
Stsc84g00014 585 Gene3D - 153 220 IPR041966 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc84g00014 8 101 C2H2 Transcription Factor Family AT5G61190 52.128 2.00e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc84g00014 - - ahf:112782923 948.347