Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc84g00011 | ATGGATTTGGATGATTTCCGATCCATATTGGATACAGCCGGCGTCGACGTTTGGCTCTTCATCGACACCGCCATCACCGTCGCCTCCCTGGATTGCGGCGACGAGCTTAGGCGACGGAGAGATGGAATCATAGAACGAATCTTCGCTGCCACCACGCCTCCTCCGCCCTGCCGCAACTGCGACGGCGATCGTAACCTGAGGTCCAATGGCCACCAAATCAAGAAACGCCTCAGCCCTAGCCCTAGCCCTCAGCGACAACACAGCCACCATCAGCAACGTCGTGGTGGTCGTGGTTCCGCCGCTGCAGTTTCTCCCTCGACGCCGCAGTCTCTCGGAGATGAGGATGACAACGGCCACAACGACGGCCCCGAAGACGAACGTGAAGAGTTGGATCCTTACGGCGGCTTGTTCGATGACGAGCAGAAGAAGATTCTAGAGATTAAAGAGCAGCTCGAAGAACCTGACCAGCCTGAAGAATCGTTGGTGGAGCTGCTGCAAAATCTCGCGGACATGGATATTACATTCCAAGCGCTTAAGGAGACTGACATTGGGAGGCACGTGAATCGGTTGAGGAAGCATCCCTCTAATGACGTTCGCAGATTGGTGAAGCTACTTGTCAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTAAGGTTGAATCAACCGGGTGGAACAGCTTCTCTCATGGCTGATGGGGACTCTCCACCGCTGAAAAACACCCAAAACGGGCATCATCAGATTCCTGATTTTGCATACTCGCCAAATCCACACAATGGAAGTTCTGGGTCTGACCGTAACACCTCAGAGGCAGAACCAAAACCAAAAGTGATTCCCCGCAAAGAAGCTCCACCAAAACCAACGCCGCCACCTTCAGTCCCTACCCCTTCCATCGCCTTCCAAAACAGACAGAGAGAGCAAAGAGATAATAGAGATTTTGATGCGGAGAGGCTTGCTTCGGCGAGGAAGCGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGCGAAAAAGCAAAGAACGATTCAGGTGATGGACATCCACGAGTTACCAAAGTCAAAACCCAAGAATGCCTTCTTTGGAAAGAACAAAGGCGGGGGCGGTTCTCAGGGAAGGCACTGGTGA | 1119 | 0.5264 | MDLDDFRSILDTAGVDVWLFIDTAITVASLDCGDELRRRRDGIIERIFAATTPPPPCRNCDGDRNLRSNGHQIKKRLSPSPSPQRQHSHHQQRRGGRGSAAAVSPSTPQSLGDEDDNGHNDGPEDEREELDPYGGLFDDEQKKILEIKEQLEEPDQPEESLVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVRLNQPGGTASLMADGDSPPLKNTQNGHHQIPDFAYSPNPHNGSSGSDRNTSEAEPKPKVIPRKEAPPKPTPPPSVPTPSIAFQNRQREQRDNRDFDAERLASARKRLQENYKEAENAKKQRTIQVMDIHELPKSKPKNAFFGKNKGGGGSQGRHW | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc84g00011 | 372 | Pfam | TFIIS helical bundle-like domain | 164 | 213 | IPR017923 | - | |
Stsc84g00011 | 372 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED | 1 | 372 | IPR044790 | - | |
Stsc84g00011 | 372 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
Stsc84g00011 | 372 | Coils | Coil | 314 | 341 | - | - | |
Stsc84g00011 | 372 | CDD | TFIIS_I | 141 | 214 | - | - | |
Stsc84g00011 | 372 | MobiDBLite | consensus disorder prediction | 344 | 372 | - | - | |
Stsc84g00011 | 372 | ProSiteProfiles | TFIIS N-terminal domain profile. | 139 | 216 | IPR017923 | - | |
Stsc84g00011 | 372 | MobiDBLite | consensus disorder prediction | 222 | 316 | - | - | |
Stsc84g00011 | 372 | MobiDBLite | consensus disorder prediction | 73 | 135 | - | - | |
Stsc84g00011 | 372 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 142 | 222 | IPR035441 | - | |
Stsc84g00011 | 372 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 138 | 223 | IPR035441 | - | |
Stsc84g00011 | 372 | SMART | TFS2_5 | 144 | 215 | IPR003617 | GO:0005634 | |
Stsc84g00011 | 372 | MobiDBLite | consensus disorder prediction | 234 | 267 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc84g00011 | Stsc-Chr84 | 111481 | 114478 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Stsc84g00011 | Med26 | 1.5e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc84g00011 | - | - | aip:107622503 | 625.165 |