Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc849g00001 ATGGGGAAAATGGGAACCCCATTTAAGGGAATAATTCAAGATGTCAAAGGAAGAGCTGAATGCTACAAGCAAGATTGGGTTTTGGGATTCTGTTCTGTTCTAAGATTATTGGCTCCAACATTCTACATATTCTTTGCTTCTGCTCTCCCTGTCATTGCTTTTGGAGAACAACTAAGTAGAGACACAGATGGAACCTTGAGCACTGTAGAAGCATTGGCATCTACTGCAATTTGTGGAATTATCCACTCTATAATTGGTGGCCAGCCTTTGTTGATTGTAGGAGTTGCTGAACCAACTGTTATAATGTACACTTATCTCTACAATTTCAGCAAGAAAACACCTGAACTTGGTTCAAAACTCTTTCTTCCTTGGGCTGGATGGGTTAATGTTTGGAGTGCACTCTTCTTGATTCTGCTTGGGGTTTTTAATGCTTGCACTGTAATCACAAGGTTTACAAGAGTTGCCGGGGAGTTGTTCGGCATGCTAATTACTGTTCTTTTCTTTCAGCAGGCTATTAAGGGATTGGTTGAGGAGTTCGGCACGCCGAAGTCTGAAAACCCGTTGGCAGAAGAATTTCAATTCCAGTGGCGGTACGTTAATGGATTGCTTGGAATCATTTTCTCTTTCGGAGTACTAGTCACTTCCCTTAAAACCAGAAAAGCAAGAACATGGCTATATGGAACAAGGTGGGTACGAAGTTTTATTGCAGATTATGGGGTTCCATTGATGGTAGTGTTATGGACAGCACTGTCTTATGTTGTGCCCGGCAAAGTTCCGGAAGGTGTTCCTAGAAGGTTGGTTTCTCCGCTTCCTTGGGAATCTGCATCTCTGTCTCACTGGACAGTAGTGAAGGATATGGGGCAGGTTCCCTTTATTTACATAATTGCAGCAATTATTCCAGCTTTGATGATAGCAGGACTATACTTTTTCGATCATAGTGTATCTTCCCAGATGGCTCAACAGGAGGAGTTCAATCTTCAAAAGCCATCGGCCTACCACTACGACATGTTTCTGCTTGGAATAATGACTTTGATTTGCGGTCTCCTTGGCCTTCCTCCATCAAACGGAGTCATTCCGCAGTCACCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAAGCAGTTGATCAAGAAGGAAGTGGTAAAAAGTGCCAAGGAATGCATTAAGCTGAAAAAGACAAAGTCCGAAATATATGGCACCATGCAGGCTGTCTTCGAAGAGATGGATACGGATCCTACTGCTAAAGAGTTGGAGAATTTGAAGGAAGCTGTAATGAACCCTGATGCTAAGGATGGAACAAAGAAAAACTTTGATCTTGAGGAACACATAGATGACTATCTACCGGTCCGGGTTAATGAGCAAAGAATGACCAACTTAATGCAGTCCCTTCTGATTGGCCTATCAGTTTTGGCCATCTCTGTTATCAAAAGGATACCCACCTCGGTTTTATGGGGATATTTCGCTTACATGGCAATTGATAGTTTACCCGGGAATCAGTTTTGGGAAAGGATATTGCTTCTCTTCATTGCTCCAAGACGACGATCTAGAATTTTGGAAGGTTCTCATGCCTCATTTGTGGAGACAGTACCATTCAAGACCATAGCTGCTTTTACAGCCTTCCAATTAGCATATTTTGGAATCTGTTATGGGATGACATGGATACCGATAGGCGGAATTTTGTTTCCACTACCATTCTTCCTTCTCATACTTGTAAGGGAGCACCTGCTTCCAAAGCTGTTCAAACCCCGCGATCTTCAAGAACTCGATGCTTCCGAATATGAGGAGATTCTTGGTGCTCCACGTGGTTCCCTTAGCATGTCACTGCAGGATAAGGAAACCAGCGATGGGGATGAGAGTGTAGAAGATTATTGTGATGCTGAGATCTTAGATGAGATGACAACTAGCAGAGGAGAGTTGAAACTCAGAGCTGTGAGCTTCAATGATGGAAACTGCAACGATGATGGAAACCGGAGTTTCAACTTTAGAAATCGCAGCTTCAATGTTAGAAATCGGCGCAGCTTCAATGCTAGATACCGCCACAGCTTCAATGATAGATACCTACAAGGCTTCAATGGAAATGCTGTTTGA 2088 0.4301 MGKMGTPFKGIIQDVKGRAECYKQDWVLGFCSVLRLLAPTFYIFFASALPVIAFGEQLSRDTDGTLSTVEALASTAICGIIHSIIGGQPLLIVGVAEPTVIMYTYLYNFSKKTPELGSKLFLPWAGWVNVWSALFLILLGVFNACTVITRFTRVAGELFGMLITVLFFQQAIKGLVEEFGTPKSENPLAEEFQFQWRYVNGLLGIIFSFGVLVTSLKTRKARTWLYGTRWVRSFIADYGVPLMVVLWTALSYVVPGKVPEGVPRRLVSPLPWESASLSHWTVVKDMGQVPFIYIIAAIIPALMIAGLYFFDHSVSSQMAQQEEFNLQKPSAYHYDMFLLGIMTLICGLLGLPPSNGVIPQSPMHTKSLAVLRKQLIKKEVVKSAKECIKLKKTKSEIYGTMQAVFEEMDTDPTAKELENLKEAVMNPDAKDGTKKNFDLEEHIDDYLPVRVNEQRMTNLMQSLLIGLSVLAISVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIAPRRRSRILEGSHASFVETVPFKTIAAFTAFQLAYFGICYGMTWIPIGGILFPLPFFLLILVREHLLPKLFKPRDLQELDASEYEEILGAPRGSLSMSLQDKETSDGDESVEDYCDAEILDEMTTSRGELKLRAVSFNDGNCNDDGNRSFNFRNRSFNVRNRRSFNARYRHSFNDRYLQGFNGNAV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc849g00001 695 Gene3D Helical hairpin bin 18 60 - -
Stsc849g00001 695 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016020
Stsc849g00001 695 Pfam HCO3- transporter family 201 374 IPR011531 GO:0006820|GO:0016020
Stsc849g00001 695 Pfam HCO3- transporter family 449 539 IPR011531 GO:0006820|GO:0016020
Stsc849g00001 695 PANTHER ANION EXCHANGE PROTEIN 3 596 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc849g00001 Stsc-Chr849 2682 6475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc849g00001 7 648 Antiporters AT4G32510 66.565 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc849g00001 K24194 - gmx:100787412 1035.79