Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc82g00007 ATGGGAAACGTTTGTACGTGTCAAGTTTCTATTGGACGAAGAGTGTATGACGCTGACTCTGATGATTCCGATTATGGAAATGATTATTTACCAAATAGATATGGACATTGTGGAGCCAAGGTCATGTTAAGTGGATCCTCTAAATTTGTGTCAATGTATTCTCAAAAGGGTCTAAAAGAAGTTAATCAAGATGCCATGACAGTATGGGAGAACTTCACCGGAGAAAAAGATATGATATTTTGTGGTGTGTTCGATGGTCATGGTCCTCAAGGGCACAAGTATGCACAAAGTATACGCAATAATCTTCCTTCAAAACTCTCTACATCAATCAAAATGTCAGAACAAATTAGTAAGAGCCAACTTGGATTAGATATCAGTAATGATGAAAACCAAAACATGCCTTGTGTTTCATGGGAGGGAAGCTTTTTGAAGTCTTTTAGTGAAATGGATAAAGATCTTGCTCAGAACGTTTGCATTGGTAGCTTTAGTGGCGGTAGCACTGCTGTCACTATAGTTAAACAGGAAAATCAGTTGATAATTGGTAATTTAGGAGATTCTCGTGCAATTCTTTGCACAAGAACAGATGATAATTTTCGTGTTCCTATTCAACTTACCGTAGACTTAAAACCAACTATTCCAAGTGAAGTTTCAAGAATCAAAAAGTGTGGAGGTAGAGTCTTTCCATCAAAAGATGATCCAAATGGTATAAATAGAATATGGATGGCTGAAGAAGATTGCCCTGGCTTGGCTATGACAAGATCATTTGGAGATTTTTGCTTAAAAGATTATGGCCTCATCTCAGTTCCTGATATAATCTATAGAAGAATTAACCACCAAGATGAATTTGTAGTTTTGGCCTCAGATGGAATATGGGATGTGCTAACAAATGAAGAAGTAATTAACATAATTAGTTCAGCACCAAAGAGGTCAGAGGCAGCAAAAACATTGGTAAAGCATGCCCTTCAAGCCTGGAGAGTCAAGTGTCCTAATTCAGTTGATGATTGTACAGCTATATGTTTGTTCTTGAATAATTAA 1035 0.3691 MGNVCTCQVSIGRRVYDADSDDSDYGNDYLPNRYGHCGAKVMLSGSSKFVSMYSQKGLKEVNQDAMTVWENFTGEKDMIFCGVFDGHGPQGHKYAQSIRNNLPSKLSTSIKMSEQISKSQLGLDISNDENQNMPCVSWEGSFLKSFSEMDKDLAQNVCIGSFSGGSTAVTIVKQENQLIIGNLGDSRAILCTRTDDNFRVPIQLTVDLKPTIPSEVSRIKKCGGRVFPSKDDPNGINRIWMAEEDCPGLAMTRSFGDFCLKDYGLISVPDIIYRRINHQDEFVVLASDGIWDVLTNEEVINIISSAPKRSEAAKTLVKHALQAWRVKCPNSVDDCTAICLFLNN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc82g00007 344 Gene3D - 43 344 IPR036457 -
Stsc82g00007 344 ProSiteProfiles PPM-type phosphatase domain profile. 49 342 IPR001932 -
Stsc82g00007 344 Pfam Protein phosphatase 2C 60 322 IPR001932 -
Stsc82g00007 344 PANTHER PROTEIN PHOSPHATASE 48 340 IPR015655 GO:0004722|GO:0006470
Stsc82g00007 344 SMART PP2C_4 43 340 IPR001932 -
Stsc82g00007 344 SUPERFAMILY PP2C-like 45 344 IPR036457 -
Stsc82g00007 344 CDD PP2Cc 49 342 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc82g00007 Stsc-Chr82 53862 57053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc82g00007 39 344 PP2C-type Phosphatase Gene Family AT1G79630 44.957 5.33e-106 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc82g00007 - - vun:114165448 419.468