Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc82g00003 ATGGTTTTCCACTCATCAAATACTAATTACTTCTTATTATTTTTGTTCATTTCAACCCTATTATTTGGGATATCATCATCTCAGCTAAGTTCATCAACTTTCTATGATTCAAGTTGCCCAAAGGCACTCTCCATAATCAAATCAGCAGTGGCCAGTGCTGTGGCCAAAGAGCATAGAATGGGTGCATCTTTGCTCCGTCTCCATTTCCATGATTGCTTTGTTAATGGATGTGATGCATCAGTTCTGTTGGATGACACTCCAACATTTACCGGAGAGAAGACAGCTGCTCCAAATTTGAATTCTTTGAGAGGTTTTGATGTAATTGATAACATCAAATCTCAATTGGAAAGTGCTTGTCCCGGAATTGTTTCTTGTGCTGATATTCTCGCTGTTGCTGCTCGTGATTCTGTTGTTTTATTGGGTGGTCCATCATGGAGTGTGGGATTAGGGAGAAGAGATTCAACAAGTGCAAGCAAAGATGCAGCAACTAAGGATATTCCATCCCCTCTTCTGGATCTTAGTGGTCTCATAACTGCTTTCTCCAATAAGGGTTTCACCACTCAAGAGATGGTAGTCCTCTCAGGAGCTCATACAACAGGACAAGCAAGATGCCAAATATTCAGAGGAAGAATCTACAATGAAACAAACATTGACACAAACTTTGCAACATCAGTGAAGTCAAATTGTCCAAGCAGTGGTGGAGACAGTAACCTCACAGCACTTGATGTCACAACAAATGTGCTATTTGACAATGCTTACTTCAAGAACCTTGTTAACAACAAAGGCCTTCTTCACTCTGATCAGCAACTCTTTATTAGTGGCGGTTCCACCACCAACTCTTTCGTCACTAACTATAGCAACAGTTATTCAGCTTTCTTTGCTGACTTTGCTAGTGCTATGGTCAAAATGGGAAATTTAAGTCCTTTAACTGGGACATCTACCCAGATTCGTGCCAACTGCACCAAAGTTAATTAA 975 0.4051 MVFHSSNTNYFLLFLFISTLLFGISSSQLSSSTFYDSSCPKALSIIKSAVASAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTPTFTGEKTAAPNLNSLRGFDVIDNIKSQLESACPGIVSCADILAVAARDSVVLLGGPSWSVGLGRRDSTSASKDAATKDIPSPLLDLSGLITAFSNKGFTTQEMVVLSGAHTTGQARCQIFRGRIYNETNIDTNFATSVKSNCPSSGGDSNLTALDVTTNVLFDNAYFKNLVNNKGLLHSDQQLFISGGSTTNSFVTNYSNSYSAFFADFASAMVKMGNLSPLTGTSTQIRANCTKVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc82g00003 324 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 Gene3D - 33 320 - -
Stsc82g00003 324 CDD secretory_peroxidase 33 323 IPR033905 GO:0004601|GO:0042744
Stsc82g00003 324 SUPERFAMILY Heme-dependent peroxidases 32 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 FunFam Peroxidase 33 175 - -
Stsc82g00003 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Stsc82g00003 324 Gene3D Peroxidase, domain 2 167 303 - -
Stsc82g00003 324 ProSiteProfiles Plant heme peroxidase family profile. 34 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 PANTHER PEROXIDASE 72-RELATED 26 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00003 324 FunFam Peroxidase 167 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc82g00003 Stsc-Chr82 7480 11060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc82g00003 24 324 Peroxidase AT5G05340 60.726 2.30e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc82g00003 K00430 - gmx:100818176 485.723