Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc82g00002 ATGGCTTCTTTTTCTTATGTGCAATGCAGCTTGGTTGTGATTGTTATGGTTTCTTTGGTGACATTGATGATGATTCCAACTACAACAAATGCAGCAGCACTTAATCCTTATTTCTATAACAGAGTTTGTCCCCAAGCATTGCCAGTTATAAGGAGGGTTGTTCAAAAGGCAATTATTCGTGAAAGGAGAATGGGAGCTTCTTTGCTGCGTTTGCATTTCCATGATTGCTTTGTTAATGGGTGTGACGGATCGGTTCTACTAGATGACATGGCAAACTTCACCGGAGAGAAGACAGCAAAACCAAACCTCAACTCAATCAGAGGTTTCCAAGTTGTTGATCAGATTAAGGCTGCCGTTGATAAAGCTTGCAAACGACCTATCGTTTCATGTGCCGATATCTTAGCTCTTGCTGCTCGCGACTCTGTTGCCATAGACCTTGTTGCCCTCTCTGGTGCCCACACAATTGGCTTCTCAAAGTGCAAAAATTTCAGGAACAGAATCTACAACGACACTAACATTGATGCCAACTTTGCAAGCTTTCTCAGGGCCAATTGCCCTAGCACTAGTGGTGTTGGTGACAACAATTTGGCACCGTTGGATTCAATTGCTCCATCAAGGGTTGATAATTTTTACTACAAGATGTTGTTGGGGAAAAAGGGACTTTTGCATTCGGATCAGGAGTTATATGGTGGGAATGGTACTACTTCTGAGAGTGTTAAGTTAGTTAAGCTTTATAGCATTAACCCTTTTGCTTTTGCAATGGACTTCAAAAGTTCAATGATCAAGATGGGTAATTTGAGCCCTCTTACTGGGAAAAACGGTGAGATTAGGCTCAATTGCAGAAGGGTTAATTAA 855 0.4164 MASFSYVQCSLVVIVMVSLVTLMMIPTTTNAAALNPYFYNRVCPQALPVIRRVVQKAIIRERRMGASLLRLHFHDCFVNGCDGSVLLDDMANFTGEKTAKPNLNSIRGFQVVDQIKAAVDKACKRPIVSCADILALAARDSVAIDLVALSGAHTIGFSKCKNFRNRIYNDTNIDANFASFLRANCPSTSGVGDNNLAPLDSIAPSRVDNFYYKMLLGKKGLLHSDQELYGGNGTTSESVKLVKLYSINPFAFAMDFKSSMIKMGNLSPLTGKNGEIRLNCRRVN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc82g00002 284 SUPERFAMILY Heme-dependent peroxidases 34 284 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 ProSitePatterns Peroxidases proximal heme-ligand signature. 145 155 IPR019793 -
Stsc82g00002 284 CDD secretory_peroxidase 34 283 IPR033905 GO:0004601|GO:0042744
Stsc82g00002 284 FunFam Peroxidase 133 263 - -
Stsc82g00002 284 ProSiteProfiles Plant heme peroxidase family profile. 33 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 Pfam Peroxidase 145 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 Pfam Peroxidase 51 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 Gene3D - 264 284 - -
Stsc82g00002 284 Gene3D Peroxidase, domain 2 145 263 - -
Stsc82g00002 284 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Stsc82g00002 284 Gene3D - 38 143 - -
Stsc82g00002 284 PANTHER PEROXIDASE 72-RELATED 31 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 PRINTS Haem peroxidase superfamily signature 145 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00002 284 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc82g00002 Stsc-Chr82 3809 6117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc82g00002 32 284 Peroxidase AT5G05340 49.007 8.78e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc82g00002 K00430 - gmx:100816580 355.525