Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc82g00001 CTAGGAGGTCCACACTTTCGTTACCATGTACCCTTGGGAAGAAGAGACTCTACAACTGCAAGCTACGAAGCTGCAAATACAAGCCTTCCTTCCCCAAATTCAAACTTCTCAGAGCTTCTCTCTAATTTCAATTCTCATGGGCTAGGCCTCAATGACCTCGTGGCCCTTTCTGGGGCCCACTCAATTGGATTCTCTCAATGTTCTTCCTTTAAGGATAGGCTCTACAAATACAACGATACCGACATTGAACCAAAATTTGCATCCGATTTGAAATTACATAATTGCCCTCTAAAGGGTGGAGATACTAATTTGACACCGTTTGATTCCACTAGTGAATCATTTGACAATGTCTACTACAAACAATTGTTGGTTAACAAGGGGCTTCTTCATTCTGATCAAGAACTCTTCAAGGGTTATAATAATAATAAGAGGAGGAGTAGTGAGAGTGATAGATTGGTGAAGCTATTTAGTAGGAATCCAATTGCTTTTGCCAAAGCATTCAGAGATTCTATGATCAAGATGGGTAACATGAAGCCTCTTGTTGGAAATGAGGGTGAGATTAGACTTAATTGTAGAAAAGTTAATTAG 588 0.398 LGGPHFRYHVPLGRRDSTTASYEAANTSLPSPNSNFSELLSNFNSHGLGLNDLVALSGAHSIGFSQCSSFKDRLYKYNDTDIEPKFASDLKLHNCPLKGGDTNLTPFDSTSESFDNVYYKQLLVNKGLLHSDQELFKGYNNNKRRSSESDRLVKLFSRNPIAFAKAFRDSMIKMGNMKPLVGNEGEIRLNCRKVN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc82g00001 195 FunFam Peroxidase 30 174 - -
Stsc82g00001 195 PRINTS Plant peroxidase signature 51 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PRINTS Plant peroxidase signature 121 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PRINTS Plant peroxidase signature 4 19 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PRINTS Plant peroxidase signature 169 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PRINTS Plant peroxidase signature 105 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PRINTS Haem peroxidase superfamily signature 52 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PRINTS Haem peroxidase superfamily signature 4 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PRINTS Haem peroxidase superfamily signature 107 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 ProSitePatterns Peroxidases proximal heme-ligand signature. 52 62 IPR019793 -
Stsc82g00001 195 Gene3D Peroxidase, domain 2 30 175 - -
Stsc82g00001 195 Pfam Peroxidase 2 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 PANTHER PEROXIDASE 72-RELATED 2 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 ProSiteProfiles Plant heme peroxidase family profile. 1 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 SUPERFAMILY Heme-dependent peroxidases 6 195 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc82g00001 195 Gene3D - 6 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc82g00001 Stsc-Chr82 273 860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc82g00001 2 195 Peroxidase AT4G36430 49.500 2.37e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc82g00001 K00430 - gmx:100816056 230.335