Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc805g00005 ATGGAATTTCTTGTGGCATTAGCAACCGGAGTTGTGACAAAACTTGGTGAGTCAATAATATCACCAATCACAAACCAATTTGGATACATAATCCGCTACAAAAAGAATGTGAAAGTTTTGGAGAGCGAGATGAAGGAATTGGAAGGCAAGAAACGTGCAGTGCAAGGAACCGTTGATGCAGATAAAAGGAATTCACTTCAAATTGCATCCAATGTGGAAGATTGGCTTTCCAAGGTAGCAACAATGGAGAATGAATTGCAAGGATTCTATGATGACCATGAAGAACAAGTTATGATGATGAAAAGCAAGTGTCACAGTTTGGTGTCACGTTATTCACTGAGCAAGAGAGCCAAGAAATTAAGCACTGATATCTTGAGGCTCAAGGAATCGAATTTTGATGTGATATCTTACCCTGCACCCCCACCAAGACTTGGATCATCAACCTTCTTCAATGGCGGCGATACTACTACTAGGATCTTCCAAACAAGAGAATCAATCATGTGTGAGGTTATTGAGAAACTGAGAGATGAAGATGTGAAGAGGGTTAGCATCTGTGGAATGGGTGGTGTTGGAAAAACAACATTTGTTAAAGAAGTGATCAAGATTTTGGAGGCAGAAGAAGAAGAAGATAATAACAAGTGTTTTGATGAGGTTGCCATGGCAGTGGTGTCTCAAACTCCAGATTACAGGAAGATGCAAGGTCAAATTGCTGATGCTATTGGATTGAAGTTTGACAAGGAAACTGATCAAGGAAGATCACTGCAACTGCATGATCGGTTGAAGAACATTGATAGTGTTCTGATAGTGCTAGATGATGTTTGGATGGAGCTTGATTTTGAATCTATTGGAATTCCTTCCACAAATTGCAAGATTCTATTCACTTCAAGAATCCAAGATGTTTGCATCAAGATGAGGAGTCAAAGCAACTTCACAATCTCTGTCTTGTCTCGCGACGAAGGCTGGGATCTTTTCCATGACAGTGTTGGAGCTGATCTTCTACAGAAACGTGACATCCAAGGCATAGCAAGAGAAATTGCGAGTGAATGCGGGGGATTGCCAATTGCGATTGTAACCATAGCGAAAGCATTGGCGAATAAGGAGAAGCATGCTTGGGAGGATGCATTGGAGCAACTGAGGAATTCGCCGGTGAAATCTTTTCTTGAGATGCAAGCTACCGTCTATTCGTGCATTGAGCTAAGTTACAACTTTCTTGGTGCTGAAGAAAAGTTGTTCCTTTTCCTCTGTTACTTATTCCCAGAAGACTTTGACATTCCTATAGAAGCCCTGCTCAGGCATGGTGTGGGATTAGGAGTGTTCAAAGGCATTGATGCTTTGTGGAAAGTTCGAAATCGGGTGCATACAATTGTTGACAGACTAAAACAATGCTTCATGTTGTTAGATAGCAATGTGGAAGAGTGTGTCAAAATGCATGATGTTGTTCGCGATGCTATCGGTTCTATAGCAGCACAATCTTATGGCAGTTATAGCAGTGCAATCTCACTGATCTTTGAGGAGAAAACAGAGAATCTTGATGTTTCAAATTGTCAAGAACTCAAGGTACTGAGTCTGCAAAATGTGTCCATTAATTCAATGCCTTCTGTGGTTGCAGTTTTGGAAAACATCCACACTCTAAGATTAGAAGCTTGCAATGTTGGAGACATATCCATAATTGGCCAGAAACTCAAGAAATTGGAGATTCTAAGCTTTGCTAAATCAAATATCAAGGTATTGCCCTTAGAAATTGGGCAACTAACCTTGCTAAGACTATTGGATTTAACTGAATGCAATTCTCTTATTCAAGTTTCTGCTACTGTCTTGGAAAGCTTGTCTAGGCTTGAAGAACTCTACCTTAGAGCAAGAAACTTTCCCTCGAAGGAATCGAATCGTATCCTCTTTGAGTTGCAATGCTTATCTCATCAGCTAAAAGTTTTTGAGTTCGCATTTGTTATGGTCGATGAATCTCTTCCCAGAGACCTAATCTTCAAAAACATAGTAAGATTTTGGGTCTATGTCGGAGATTCATCGACCATTTCCCACGGCCTTGTTCGTAGGGGATACCTACACCCAAATGTGCTGGCATTAAACAACACATATTACAATTATATCAAGAAGAGTGTCACTCTTCAACATTTTCTTAAAAGAGTTGAAATTCTCAGCTTAGATGATATCAAGAACTTGAAATGTGTCATATCAGATTTAGATGAAGAGGGGTTTCCACTTCTGAAGAATCTCAGCATTGAGTCCTGCAACAATTTAGAGTATGCTTTAGATTCATGTGACCACTGTGTCTTTCCACAAGTTCAATCAATTTCTTTGAGGAATTTGGAGAATTTCAAAGCAATAACAAGTCATGTGGCTAATCACTTTGACTTTGATGCATGCCAATGCTTTGGAAGCCTGCAAATTCTTAAGGTGGAATATTGTAAGAGTTTGAAGACAATCTTCACTTCATTGTTTCCAAGGAGAACTAGTTTGGCAAAACTTCAATGCTTGCATGTGCTTGAAAGCCATGGAATAGAATGCATTGTCTCATTAAGCAATACAATGAATGTTGATGACTCAATGATTAAGTTTTCTAGCTTAGTGGAATTGAAGCTGCAAGAACTCCCAAATTTTACTGCATTCATCAAGGTTCAAGAATCTGATTTATTTGAAAATTCTACTTCAGAATCAGATTTGGGTGAACATAGAGTCACTGGTTCTGCACTTTTTGAATCTAATTCATTGGAATTATTTCCAAAGTTAGAGAAAATTCTGCTACGTGCATGTTCATCATTAAACACAGTTTTTAACATGAAGCAATCACAATCAGAAGATGCAGTTTTTGCTCAACTGAAAGACCTAGAGTTATCATGGCTCAATAATCTGTACCACATTTGGGGTTCTGTTCCAAGCAAAAACATTCAAGGCTTTCATAAATTGAAATCAGTCAAAGTTGCAAACTGTGATTCTTTGAAATATATATTTACTCCCAGCATTGTAAGATCACTCACTCAACTCAAGAAATTGGTGATACAAAGTTGCATGTCCGTAGAGAATTTTGTTGGGAATGTTGAACAAGGCCAAGATGATAGTGAAAGTGAAACTCAAACCCTTGTGTTTGTTCAATTGGAATCTTTAACACTTAAGGATCTGCCACAGCTAGTGAATCTTAATAGTCCAAATAATTGTTGCATGATATTGTGGCCAGCTATGAGATCTTTGTGCATTGATGGATGCCCCTTGCTCAAGACATCTTCTAATGTGTGTGTACAAGAGAATTCCAATGTCATATCCAACTCAACAACCACTACCCATGATGTTGGAACTTCTTCTTATATAGAAGATTCTCCTAGTCTAAGGTTTCTTCAATGTCGTTTTGGAGGCACAAGGGAATCTTTTGTTTCCAATTCAAAGGCAAAAAAG 3405 0.3868 MEFLVALATGVVTKLGESIISPITNQFGYIIRYKKNVKVLESEMKELEGKKRAVQGTVDADKRNSLQIASNVEDWLSKVATMENELQGFYDDHEEQVMMMKSKCHSLVSRYSLSKRAKKLSTDILRLKESNFDVISYPAPPPRLGSSTFFNGGDTTTRIFQTRESIMCEVIEKLRDEDVKRVSICGMGGVGKTTFVKEVIKILEAEEEEDNNKCFDEVAMAVVSQTPDYRKMQGQIADAIGLKFDKETDQGRSLQLHDRLKNIDSVLIVLDDVWMELDFESIGIPSTNCKILFTSRIQDVCIKMRSQSNFTISVLSRDEGWDLFHDSVGADLLQKRDIQGIAREIASECGGLPIAIVTIAKALANKEKHAWEDALEQLRNSPVKSFLEMQATVYSCIELSYNFLGAEEKLFLFLCYLFPEDFDIPIEALLRHGVGLGVFKGIDALWKVRNRVHTIVDRLKQCFMLLDSNVEECVKMHDVVRDAIGSIAAQSYGSYSSAISLIFEEKTENLDVSNCQELKVLSLQNVSINSMPSVVAVLENIHTLRLEACNVGDISIIGQKLKKLEILSFAKSNIKVLPLEIGQLTLLRLLDLTECNSLIQVSATVLESLSRLEELYLRARNFPSKESNRILFELQCLSHQLKVFEFAFVMVDESLPRDLIFKNIVRFWVYVGDSSTISHGLVRRGYLHPNVLALNNTYYNYIKKSVTLQHFLKRVEILSLDDIKNLKCVISDLDEEGFPLLKNLSIESCNNLEYALDSCDHCVFPQVQSISLRNLENFKAITSHVANHFDFDACQCFGSLQILKVEYCKSLKTIFTSLFPRRTSLAKLQCLHVLESHGIECIVSLSNTMNVDDSMIKFSSLVELKLQELPNFTAFIKVQESDLFENSTSESDLGEHRVTGSALFESNSLELFPKLEKILLRACSSLNTVFNMKQSQSEDAVFAQLKDLELSWLNNLYHIWGSVPSKNIQGFHKLKSVKVANCDSLKYIFTPSIVRSLTQLKKLVIQSCMSVENFVGNVEQGQDDSESETQTLVFVQLESLTLKDLPQLVNLNSPNNCCMILWPAMRSLCIDGCPLLKTSSNVCVQENSNVISNSTTTTHDVGTSSYIEDSPSLRFLQCRFGGTRESFVSNSKAKK 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc805g00005 1135 Pfam NB-ARC domain 164 402 IPR002182 GO:0043531
Stsc805g00005 1135 Gene3D - 152 313 IPR027417 -
Stsc805g00005 1135 Coils Coil 30 57 - -
Stsc805g00005 1135 Gene3D Ribonuclease Inhibitor 500 869 IPR032675 -
Stsc805g00005 1135 Gene3D - 314 398 IPR042197 -
Stsc805g00005 1135 SUPERFAMILY L domain-like 473 1017 - -
Stsc805g00005 1135 Coils Coil 361 381 - -
Stsc805g00005 1135 PRINTS Disease resistance protein signature 181 196 - -
Stsc805g00005 1135 PRINTS Disease resistance protein signature 582 598 - -
Stsc805g00005 1135 PRINTS Disease resistance protein signature 260 274 - -
Stsc805g00005 1135 PRINTS Disease resistance protein signature 349 363 - -
Stsc805g00005 1135 Gene3D Ribonuclease Inhibitor 901 1100 IPR032675 -
Stsc805g00005 1135 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 895 1094 - -
Stsc805g00005 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc805g00005 Stsc-Chr805 22689 26449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc805g00005 178 482 WRKY Transcription Factor Family AT5G45050 27.532 3.92e-10 62.4