Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc803g00002 | ATGAAGATGGGTTCCTTCTTCATGAGGGCCTCCTCTGCTCTCAAAAAATACCCTTCATCCTCCAAGCTTCTTCTCCTCTGCACTCTCAGCTTCAGTGGTGGAGGTGTAGTGGCATACTCAGAATCAAGATCAGAAACTGAACATCCTGTTGTTGATGCTGGTGTGGTCCCAAAAAAGAAAGTAGTGGTTCTTGGAACCGGGTGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCTTCACGGTACGATGTTCAGGTTGTTTCGCCACGTAACTACTTTGCATTCACTCCCTTGTTACCCAGTGTCACTTGTGGAACAGTTGAAGCACGGAGCATTGTAGAGCCGGTTCGAACCTTAATAAAAAAGAGTAAAGGTGAAATCAAATATTGGGAGGCAGAGTGTGTCAAGATTGATGCTGCAAACAGAAAGGTCTTTTGTAATTCCAATATCGACAACTTAGTTGGAAGAGGCAAATTTTCTTTGGACTATGACTTCTTGGTTTTAGCAGTTGGATCACAAGTAAATACTTTTAACACCCCTGGAGTGAAAGAGAACTGCCATTTTCTGAAGGATATTGAGGATGCTAAGAGGATCAGACTGTCTATCACAGATTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCCGAAGAAGAGCGAAGGTCGAATCTTCATTTTGTAGTTGTTGGAGGGGGTCCAACTGGAGTGGAATTTGCTGCAGAGCTCCATGATTATGTCCAAGAAGATTTGACAAACTTATATCCTGCTGTTAAGGATTTGGTGAAGATAACATTGATTCAATCAGGAGATCACATCCTGAATACGTTTGATCAAAGAATAAGTACATTTGCTGAGCAGAAGTTTACAAGAGACGGTATAGAGGTTCAAACGGGATGCCGTGTCATCAGTGTTAGCGACAAGGAAATTACAATGAAGGTGAAATCAACAGGAGAGGTTTGCTCTGTGCCGCACGGATTGATTGTCTGGTCCACTGGCATTTCAACTATTCCAGTTATAAGGGACTTAATGGAACAAGTTGGTCAGGGTAAAAGACGTGTACTAGCAACCGATGAATGGTTGCGAGTGAAAGGAAGTGAAGATGTGTATGCAATTGGTGATTGTTGTACAATAGATCAACGAAAAATCATGGATGATATCTCAGCCATATTTGCGGCTGCGGACAAAAACAACTCCGGTACATTAACCATCGAAGAATTCCAGGATGTGATGGATGACATCTTACTAAGATATCCACAAGTTGAACTTTTCTTGAAGAAAAAGCATCTTCTTGATTTCACCTCTCTGTGGTTAGATTCACAAGGGAATGAAAGAAAAGAGATAGACATAGAAGGGTTTAAGCAGGCTCTTTCTCATGCAGATTCACAGATGAAGAGTCTTCCAGCTACTGCACAGGTTGCTGCCCAACAAGGTACCTATCTAGCTAGATGCTTTAACCGAATGGATCAATGTGAAGAGAATCCTGAAGGTCCTCGGCGATTTAGAGGAACCGGACGACACAAGTTTCTTCCCTTCCGGTATAAGCATTTCGGGCAATTCGCACCGCTGGGTGGTGAGCAAGCGGCCGCAGAACTCCCCGGAGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTCTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGGTATTGGTGATGTCTGATTGGACTAGAAGATTCATCTTTGGAAGAGACTCAAGTCGTGTTTAA | 1740 | 0.4362 | MKMGSFFMRASSALKKYPSSSKLLLLCTLSFSGGGVVAYSESRSETEHPVVDAGVVPKKKVVVLGTGWAGTSFLKDLDASRYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRTLIKKSKGEIKYWEAECVKIDAANRKVFCNSNIDNLVGRGKFSLDYDFLVLAVGSQVNTFNTPGVKENCHFLKDIEDAKRIRLSITDCFEKAVLPSLSEEERRSNLHFVVVGGGPTGVEFAAELHDYVQEDLTNLYPAVKDLVKITLIQSGDHILNTFDQRISTFAEQKFTRDGIEVQTGCRVISVSDKEITMKVKSTGEVCSVPHGLIVWSTGISTIPVIRDLMEQVGQGKRRVLATDEWLRVKGSEDVYAIGDCCTIDQRKIMDDISAIFAAADKNNSGTLTIEEFQDVMDDILLRYPQVELFLKKKHLLDFTSLWLDSQGNERKEIDIEGFKQALSHADSQMKSLPATAQVAAQQGTYLARCFNRMDQCEENPEGPRRFRGTGRHKFLPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVMSDWTRRFIFGRDSSRV | 579 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc803g00002 | 579 | PANTHER | NADH DEHYDROGENASE | 57 | 579 | IPR045024 | GO:0003954|GO:0006116 | |
Stsc803g00002 | 579 | ProSitePatterns | EF-hand calcium-binding domain. | 393 | 405 | IPR018247 | - | |
Stsc803g00002 | 579 | SUPERFAMILY | FAD/NAD(P)-binding domain | 224 | 390 | IPR036188 | - | |
Stsc803g00002 | 579 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 163 | 181 | - | - | |
Stsc803g00002 | 579 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 224 | 242 | - | - | |
Stsc803g00002 | 579 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 61 | 80 | - | - | |
Stsc803g00002 | 579 | FunFam | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial | 51 | 409 | - | - | |
Stsc803g00002 | 579 | Gene3D | - | 423 | 579 | - | - | |
Stsc803g00002 | 579 | Gene3D | - | 50 | 422 | - | - | |
Stsc803g00002 | 579 | SUPERFAMILY | FAD/NAD(P)-binding domain | 58 | 276 | IPR036188 | - | |
Stsc803g00002 | 579 | FunFam | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial | 426 | 578 | - | - | |
Stsc803g00002 | 579 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 59 | 382 | IPR023753 | GO:0016491 | |
Stsc803g00002 | 579 | SUPERFAMILY | EF-hand | 342 | 465 | IPR011992 | - | |
Stsc803g00002 | 579 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 380 | 415 | IPR002048 | GO:0005509 | |
Stsc803g00002 | 579 | SMART | efh_1 | 384 | 412 | IPR002048 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc803g00002 | Stsc-Chr803 | 13627 | 17629 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc803g00002 | 1 | 579 | Chloroplast and Mitochondria Gene Families | AT4G21490 | 63.356 | 0.0 | 759 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc803g00002 | K03885 | - | gmx:100793566 | 967.222 |