Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc802g00002 ATGGCTGATGCCAGTCCTAGGACTGATATCTCTACAGATGTTGACACTGATGATAAGAATCAGCGGTCTGATAGAGGTCAGTCCCTTGCTGCCGTGGCTTCTGATTCAAGTGACAGATCAAAGGATAAAAGCGATCAGAAGAGTCTTCGCAGGCTTGCTCAAAATCGTGAGGCTGCTCGCAAAAGTCGGCTGAGGAAAAAAGCCTATGTCCAACAACTGGAAAGTAGTCGTTTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCGAGCTAGGCAACAGGGAATCTTCATATCAAGCTCGGGTGATCAAGCACATTCACTGAGTGGCAATGGGGCAATGCAATTCGATGCTGAATATGCCAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTTAGAGCAGCTGTAAATTCACATGCAGGCGATACTGAACTTCGAATGATTGTTGATGGTGTAATGTCGCATTATGATGAAATTTTTAGGCTGAAAGGCGTTGCAGCTAAGGCTGATGTTTTCCACTTGCTGTCTGGGATGTGGAAAACACCTGCAGAGAGGTGCTTTTTGTGGCTTGGTGGTTTTCGATCATCTGAACTCCTCAAGCTCCTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAGCTTTTGGGTATTACGAACTTGCAGGAGTCCTCCCAGCAAGCAGAAGATGCATTATCTCAAGGCATGGAAGCATTGCAACAATCCCTCGCTGAGACATTGTCCACCGGATCACAAAATTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCAATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTTATTCGACAGCAAACTCTACAGCAAATGCACCGTATTCTAACGACTCGCCAATCAGCTCGTGCACTCCTTGCAATACATGACTACTTTTCCCGGCTGCGTGCCCTTAGTTCACTCTGGCTGGCCCGCCCAAGGGATTAA 981 0.474 MADASPRTDISTDVDTDDKNQRSDRGQSLAAVASDSSDRSKDKSDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHAGDTELRMIVDGVMSHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLLGITNLQESSQQAEDALSQGMEALQQSLAETLSTGSQNSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc802g00002 326 MobiDBLite consensus disorder prediction 36 59 - -
Stsc802g00002 326 Pfam Seed dormancy control 129 205 IPR025422 GO:0006351|GO:0043565
Stsc802g00002 326 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Stsc802g00002 326 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Stsc802g00002 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Stsc802g00002 326 Gene3D - 46 98 - -
Stsc802g00002 326 MobiDBLite consensus disorder prediction 1 66 - -
Stsc802g00002 326 MobiDBLite consensus disorder prediction 10 24 - -
Stsc802g00002 326 FunFam BZIP family transcription factor 46 95 - -
Stsc802g00002 326 Coils Coil 123 143 - -
Stsc802g00002 326 Pfam Basic region leucine zipper 43 89 IPR004827 GO:0003700|GO:0006355
Stsc802g00002 326 Coils Coil 66 93 - -
Stsc802g00002 326 ProSiteProfiles DOG1 domain profile. 112 323 IPR025422 GO:0006351|GO:0043565
Stsc802g00002 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Stsc802g00002 326 PANTHER TRANSCRIPTION FACTOR TGA9 12 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc802g00002 Stsc-Chr802 8928 13865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc802g00002 1 326 bZIP Transcription Factor Family AT3G12250 79.217 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc802g00002 DOG1 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc802g00002 K14431 - zju:107428714 541.576