Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc7g00052 ATGCACCATTTAGCTGGTCACAAGAACATCGTCACCATCAAGGGTGCTTATGAAGATCCTCTCTACGTCCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAAAGGGGTCACTACACCGAGAGAAAGGCTGCAGAGTTGACCAAAATCATTGTTGGAGTTGTTGAGACTTGCCATTCCCTCGGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTCCTGTTGGTTAATAAGGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCTGTTTTCTTCAAGCCAGGTCAAGTATTCACTGACGTGGTTGGCAGTCCTTACTATGTTGCTCCTGAGGTTCTACTCAAGCATTATGGCCCCGAAGCAGACGTGTGGACAGCAGGTGTCATTCTATACATATTACTTAGTGGAGTGCCGCCATTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCTGTTTTGAAGGGACATATAGATTTTGACTCTGATCCATGGCCTCTAATATCTGATAGTGCTAAAGATCTGATTAGAAAGATGCTGTGTTCTCGGCCTTCAGAACGGTTGACAGCTCATGAAGTGTTATGTCATCCATGGATATGTGAAAATGGAGTTGCCCCTGACAGAGCATTGGACCCTGCTGTTCTTTCCCGTCTTAAACAGTTCTCTGCAATGAACAAACTAAAGAAGATGGCTTTGCGGGTAATTGCTGAAAGTTTGTCTGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACTGATAGCAGTGGTGCAATTACTTTTGATGAGCTTAAAGCTGGTCTAAGAAGATATGGGTCCACCCTTAAGGATACAGAAATACGTGATCTTATGGAGGCGGCTGATGTGGACAATAGTGGAACTATAGATTATGGGGAGTTTATCGCTGCAACAATTCATCTCAACAAGCTAGAGCGCGAGGAACATCTCATTGCAGCATTTCAATATTTTGACAAGGATGGGAGTGGCTATATTACAGTTGATGAACTTCAACAAGCTTGTATAGAACATAACATGACTGATGTTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGGGAATTTGCTGCCATGATGCAAGGCAATGCTGGAATTGGAAGGAGGACTATGCGCAACAGCCTGAATTTGAGCATGAGAGATGCACCAAGTGTCTGA 1233 0.429 MHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVETCHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDSSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATIHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACIEHNMTDVFLEDIIREVDQDNDGRIDYGEFAAMMQGNAGIGRRTMRNSLNLSMRDAPSV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc7g00052 410 CDD STKc_CAMK 1 206 - -
Stsc7g00052 410 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Stsc7g00052 410 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Stsc7g00052 410 Gene3D Transferase(Phosphotransferase) domain 1 35 216 - -
Stsc7g00052 410 Gene3D - 217 388 - -
Stsc7g00052 410 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Stsc7g00052 410 Pfam Protein kinase domain 2 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc7g00052 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Stsc7g00052 410 FunFam Calcium-dependent protein kinase 5 35 215 - -
Stsc7g00052 410 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Stsc7g00052 410 ProSiteProfiles EF-hand calcium-binding domain profile. 361 391 IPR002048 GO:0005509
Stsc7g00052 410 SMART efh_1 360 388 IPR002048 GO:0005509
Stsc7g00052 410 SMART efh_1 254 282 IPR002048 GO:0005509
Stsc7g00052 410 SMART efh_1 290 318 IPR002048 GO:0005509
Stsc7g00052 410 SMART efh_1 326 354 IPR002048 GO:0005509
Stsc7g00052 410 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc7g00052 410 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Stsc7g00052 410 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Stsc7g00052 410 SUPERFAMILY EF-hand 231 388 IPR011992 -
Stsc7g00052 410 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Stsc7g00052 410 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc7g00052 410 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 381 - -
Stsc7g00052 410 FunFam Calcium-dependent protein kinase 1 215 389 - -
Stsc7g00052 410 SUPERFAMILY Protein kinase-like (PK-like) 2 232 IPR011009 -
Stsc7g00052 410 Pfam EF-hand domain pair 255 315 IPR002048 GO:0005509
Stsc7g00052 410 Pfam EF-hand domain pair 325 386 IPR002048 GO:0005509
Stsc7g00052 410 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc7g00052 Stsc-Chr7 264960 306450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc7g00052 1 406 EF-hand Containing Proteins AT2G17290 93.120 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc7g00052 Pkinase 8.4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc7g00052 K13412 - gmx:100778173 803.127