Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc7g00050 ATGGGAACTTGCTGGGGTTCTCCAAAATTACCACCCCACAACAACTCCATCACCACCACCACCACCACCGGTAACCTCAGCGCAGGTACGGCATCAACGTCAACGTCAACGTCAACGGGGACATCGCGCTTTAGCTACACGACTTCGTCGGGAAGTGGGAACAGCAGCTCCGTTAGCAAGTTCTCCGATGATCATTATCCCGACGGCCAGATCCTACCTGCCGCAAATCTCAGGATCTTCAGTTTCTCAGAGTTGAAGGCTGCCACTAAGAATTTCAGACTTGACACGGTGCTTGGCGAGGGAGGTTTCGGCAAGGTCTACAAGGGCTGGCTCGAAGACAAGCCATCCTCCAAGAATGCAAGTGGAACCGTCATTGCCGTCAAAAAATTGAATTCGGAAAGCTTACAGGGGCTTGAGGAGTGGAAGTCAGAAGTAAATTTTCTGGGACGCCTCTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCTTGGAGGAGGCAGAACTTCTTCTAATCTATGAATTTATGCAGAAGGGAAGCTTGGAAAATCACCTATTTGGAAGGGGCTCTGCTGTTCAACCACTTCCTTGGGACATTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGTCTGGCCTTCTTGCACACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTCGATGGGGCCTATAATGCAAAGATATCCGACTTTGGTTTGGCGAAACTGGGTCCTTCAGCTAGTCGATCCCATGTTACAACTAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTTGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTTGTTTTGGTGGAGATGCTAACAGGGCTACGAGCACTTGACCCAAACCGCCCAAGTGGGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGACAGAAGAAAGCTGAAAAGCATTATGGATTCTCGGTTGGAAGGAAAATATCCGTCCAAAGCTGCGTTTCGTATAGCTCAGCTTTCGCTGAGATGTCTTGAAACTGAGCCCAAACAGAGGCCGTCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGACTTCATGCTGCCAATGAGAAACCTATGGAGCCCAAATTTGGTTCTAATCATAATCATACCCGTCGAGGTCAGCAAGCTGTGCACCATCGTTCTCCACTCCATCCATAG 1227 0.4825 MGTCWGSPKLPPHNNSITTTTTTGNLSAGTASTSTSTSTGTSRFSYTTSSGSGNSSSVSKFSDDHYPDGQILPAANLRIFSFSELKAATKNFRLDTVLGEGGFGKVYKGWLEDKPSSKNASGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEEAELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDPNRPSGQHNLTDWIKPYLHDRRKLKSIMDSRLEGKYPSKAAFRIAQLSLRCLETEPKQRPSMKEVLESLERLHAANEKPMEPKFGSNHNHTRRGQQAVHHRSPLHP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc7g00050 408 Pfam Protein tyrosine and serine/threonine kinase 94 371 IPR001245 GO:0004672|GO:0006468
Stsc7g00050 408 CDD STKc_IRAK 98 374 - -
Stsc7g00050 408 Gene3D Transferase(Phosphotransferase) domain 1 176 396 - -
Stsc7g00050 408 MobiDBLite consensus disorder prediction 1 61 - -
Stsc7g00050 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Stsc7g00050 408 FunFam Serine/threonine-protein kinase BIK1 58 175 - -
Stsc7g00050 408 SUPERFAMILY Protein kinase-like (PK-like) 64 371 IPR011009 -
Stsc7g00050 408 MobiDBLite consensus disorder prediction 377 408 - -
Stsc7g00050 408 FunFam Serine/threonine-protein kinase PBS1 176 389 - -
Stsc7g00050 408 MobiDBLite consensus disorder prediction 9 61 - -
Stsc7g00050 408 ProSiteProfiles Protein kinase domain profile. 92 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc7g00050 408 Gene3D Phosphorylase Kinase; domain 1 76 175 - -
Stsc7g00050 408 ProSitePatterns Protein kinases ATP-binding region signature. 98 129 IPR017441 GO:0005524
Stsc7g00050 408 PANTHER OS01G0588500 PROTEIN-RELATED 43 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc7g00050 Stsc-Chr7 232035 234719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc7g00050 75 379 Receptor kinase-like Gene Family AT4G02010 50.809 4.74e-101 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc7g00050 PK_Tyr_Ser-Thr 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc7g00050 - - vun:114194495 625.165