Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc7g00049 ATGGGAACTTGCTGGGGTTCTCCAAAATTACCACCCCACAACAACTCCATCCCCACAACAACCGGTAACCTCAGCGCAGGTACGGCATCAACGTCAACGTCAACGTCAACGGGGACATCGCGCTTTAGCTACACGACTTCGTCGGGAAGTGGGAACAGCAGCTCCGTTAGCAAGTTCTCCGATGATCATTATCCCGACGGCCAGATCCTACCTGCCGCAAATCTCAGGATCTTCAGTTTCTCAGAGTTGAAGGCTGCCACTAAGAATTTCAGACTTGACACGGTGCTTGGCGAGGGAGGTTTCGGCAAGGTCTACAAGGGCTGGCTCGAAGACAAGCCATCCTCCAAGAATGCAAGTGGAACCGTCATTGCCGTCAAAAAATTGAATTCGGAAAGCTTACAGGGGCTTGAGGAGTGGAAGTCAGAAGTAAATTTTCTGGGACGCCTCTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCTTGGAGGAGGCAGAACTTCTTCTAATCTATGAATTTATGCAGAAGGGAAGCTTGGAAAATCACCTATTTGGAAGGGGCTCTGCTGTTCAACCACTTCCTTGGGACATTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGTCTGGCCTTCTTGCACACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTCGATGGGGCCTATAATGCAAAGATATCCGACTTTGGTTTGGCGAAACTGGGTCCTTCAGCTAGTCGATCCCATGTTACAACTAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTTGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTTGTTTTGGTGGAGATGCTAACAGGGCTACGAGCACTTGACCCAAACCGCCCAAGTGGGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGACAGAAGAAAGCTGAAAAGCATTATGGATTCTCGGTTGGAAGGAAAATATCCGTCCAAAGCTGCGTTTCGTATAGCTCAGCTTTCGCTGAGATGTCTTGAAACTGAGCCCAAACAGAGGCCGTCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGACTTCATGCTGCCAATGAGAAACCTATGGAGCCCAAATTTGGTTCTAATCATAATCATACCCGTCGAGGTCAGCAAGCTGTGCACCATCGTTCTCCACTCCATCCATAG 1221 0.4808 MGTCWGSPKLPPHNNSIPTTTGNLSAGTASTSTSTSTGTSRFSYTTSSGSGNSSSVSKFSDDHYPDGQILPAANLRIFSFSELKAATKNFRLDTVLGEGGFGKVYKGWLEDKPSSKNASGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEEAELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDPNRPSGQHNLTDWIKPYLHDRRKLKSIMDSRLEGKYPSKAAFRIAQLSLRCLETEPKQRPSMKEVLESLERLHAANEKPMEPKFGSNHNHTRRGQQAVHHRSPLHP 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc7g00049 406 PANTHER OS01G0588500 PROTEIN-RELATED 42 373 - -
Stsc7g00049 406 FunFam Serine/threonine-protein kinase PBS1 174 387 - -
Stsc7g00049 406 ProSitePatterns Protein kinases ATP-binding region signature. 96 127 IPR017441 GO:0005524
Stsc7g00049 406 MobiDBLite consensus disorder prediction 1 59 - -
Stsc7g00049 406 MobiDBLite consensus disorder prediction 375 406 - -
Stsc7g00049 406 Gene3D Transferase(Phosphotransferase) domain 1 174 394 - -
Stsc7g00049 406 Pfam Protein tyrosine and serine/threonine kinase 92 369 IPR001245 GO:0004672|GO:0006468
Stsc7g00049 406 Gene3D Phosphorylase Kinase; domain 1 74 173 - -
Stsc7g00049 406 ProSiteProfiles Protein kinase domain profile. 90 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc7g00049 406 SUPERFAMILY Protein kinase-like (PK-like) 62 369 IPR011009 -
Stsc7g00049 406 MobiDBLite consensus disorder prediction 9 59 - -
Stsc7g00049 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Stsc7g00049 406 FunFam Serine/threonine-protein kinase BIK1 56 173 - -
Stsc7g00049 406 CDD STKc_IRAK 96 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc7g00049 Stsc-Chr7 232035 281921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc7g00049 73 377 Receptor kinase-like Gene Family AT4G02010 50.809 6.57e-101 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc7g00049 PK_Tyr_Ser-Thr 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc7g00049 - - vun:114194495 625.55