Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc7g00027 ATGGCTGCACAAGCTCTAGTATCATCATCATCTCTTGCCTTCTCAGCCGAGGTTTCCAGGCAGAGCCTTGGATCAAGACCCAATGGTTTCTCCAAAAGGGCCTCCTTCATAGTCAGGGCATCTTCCACTCCACCTGTCAAGCAAGGAGCAGACAGACCCTTGTGGTTTGCATCAAAACAGAGTCTCTCTTACTTGGATGGCAGCCTCCCTGGTGACTTTGGATTTGATCCCCTTGGACTTTCAGACCCTGAAGGAACAGGAGGGTTCATTGAGCCAAGATGGCTAGCATATGGAGAGATCATCAATGGTCGTTTCGCAATGTTGGGTGCAGCCGGTGCCATTGCACCCGAGATTCTTGGCAAGGCTGGTTTGATACCTGAGGAAACAGCACTGCCATGGTTCAAGACCGGTGTGATCCCACCTGCAGGAACATACAGCTACTGGGCAGACCCTTACACGCTCTTTGTCTTGGAGATGGCACTCATGGGATTTGCAGAGCACAGAAGGTTCCAAGACTGGGCCAAACCTGGCTCCATGGGAAAGCAATACTTCTTAGGACTCGAGAAGGGTCTTGGAGGTTCAGGTGACCCGGCTTACCCCGGAGGACCTTTCTTCAACCCCCTTGGTTTCGGCAAGGATGAGAAATCCTTGAAGGATTTGAAGCTCAAGGAAGTGAAGAATGGGAGGTTGGCCATGTTGGCAATCTTGGGTTACTTTATTCAAGGCCTTGTGACAGGAGTTGGCCCTTACCAAAACCTCCTTGATCATCTGGCTGATCCCGTTCACAACAACGTACTGACCAGTCTTAAGTTCCACTAA 819 0.5067 MAAQALVSSSSLAFSAEVSRQSLGSRPNGFSKRASFIVRASSTPPVKQGADRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc7g00027 272 SUPERFAMILY Chlorophyll a-b binding protein 51 268 - -
Stsc7g00027 272 Gene3D Chlorophyll a/b binding protein domain 54 271 - -
Stsc7g00027 272 Pfam Chlorophyll A-B binding protein 63 241 IPR022796 -
Stsc7g00027 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 267 IPR001344 GO:0009765|GO:0016020
Stsc7g00027 272 FunFam Chlorophyll a-b binding protein, chloroplastic 53 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc7g00027 Stsc-Chr7 114941 116358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc7g00027 1 272 Chloroplast and Mitochondria Gene Families AT1G61520 86.496 1.84e-168 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc7g00027 K08909 - qsa:O6P43_014419 486.493