Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc79g00013 ATGACTGGCAGAGAAATCCTCCACAAGATGAAGGAAAAAGTGTTGGGGTCATCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCTAAGCACATAACTCATGGTTTCCATTTGGTAAAGGGAAGATCAGATCATGCAATGGAAGACTATCTAGTTGCTCAATTTAAGCAAGTTGAAGATAACGAGTTGGGTTTGTTTGCAATATTTGATGGTCACTCTGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTCGATAACATCATAAATGAGCCTGACTTCTGGACTGACCCTGCTAATGCTGTGAAGAGAGCCTATAGTGTGACTGATTCTACTATTTTGGAGAAATCAGGTGAATTGGGCAGAGGGGGTTCAACCGCTGTCACAGCAATATTGATCAATTGTCAGAAGCTAATAGTGGCTAACATTGGGGACTCTCGGGCCGTCTTATCAGTGAATGGCGAAGCCAAACAACTATCGGTGGATCATGAACCAAACACAGAATGGGAGGACATCAAGAACAGAGGTGGTTTTGTATCTAACTTCCCAGGGGATGTTCCACGGGTTGATGGGCAATTAGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAACACTTGAGCTCTGATCCATATGTGACAGTGGAACTCATCGGTGATGGCGCAGAGTTTATCATATTAGCCAGTGATGGTTTATGGAAGGTCAGATTTCATATACTATTATATGATTTTTTCTCCCCATTAATTGCCTTTTAA 765 0.4261 MTGREILHKMKEKVLGSSDPDSGKGKSKMSKHITHGFHLVKGRSDHAMEDYLVAQFKQVEDNELGLFAIFDGHSGHSVPDYLRSHLFDNIINEPDFWTDPANAVKRAYSVTDSTILEKSGELGRGGSTAVTAILINCQKLIVANIGDSRAVLSVNGEAKQLSVDHEPNTEWEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSDPYVTVELIGDGAEFIILASDGLWKVRFHILLYDFFSPLIAF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc79g00013 254 CDD PP2Cc 35 238 IPR001932 -
Stsc79g00013 254 ProSiteProfiles PPM-type phosphatase domain profile. 34 254 IPR001932 -
Stsc79g00013 254 FunFam Probable protein phosphatase 2C 39 24 242 - -
Stsc79g00013 254 SMART PP2C_4 29 253 IPR001932 -
Stsc79g00013 254 SUPERFAMILY PP2C-like 30 249 IPR036457 -
Stsc79g00013 254 Pfam Protein phosphatase 2C 45 238 IPR001932 -
Stsc79g00013 254 Gene3D - 16 244 IPR036457 -
Stsc79g00013 254 PANTHER PROTEIN PHOSPHATASE 27 238 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc79g00013 Stsc-Chr79 76787 80498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc79g00013 1 238 PP2C-type Phosphatase Gene Family AT3G15260 74.286 2.29e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc79g00013 K17506 - gmx:100787942 412.92