Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc79g00012 ATGACTGGCAGAGAAATCCTCCACAAGATGAAGTGCTTTCAGGAAAAAGTGTTGGGGTCATCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCTAAGCACATAACTCATGGTTTCCATTTGGTAAAGGGAAGATCAGATCATGCAATGGAAGACTATCTAGTTGCTCAATTTAAGCAAGTTGAAGATAACGAGTTGGGTTTGTTTGCAATATTTGATGGTCACTCTGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTCGATAACATCATAAATGAGCCTGACTTCTGGACTGACCCTGCTAATGCTGTGAAGAGAGCCTATAGTGTGACTGATTCTACTATTTTGGAGAAATCAGGTGAATTGGGCAGAGGGGGTTCAACCGCTGTCACAGCAATATTGATCAATTGTCAGAAGCTAATAGTGGCTAACATTGGGGACTCTCGGGCCGTCTTATCAGTGAATGGCGAAGCCAAACAACTATCGGTGGATCATGAACCAAACACAGAATGGGAGGACATCAAGAACAGAGGTGGTTTTGTATCTAACTTCCCAGGGGATGTTCCACGGGTTGATGGGCAATTAGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAACACTTGAGCTCTGATCCATATGTGACAGTGGAACTCATCGGTGATGGCGCAGAGTTTATCATATTAGCCAGTGATGGTTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCTATCAAAGATATAAAAGATGCTCGGTCTGCAGCAAAGCACCTTACTGAAGCAGCAGTTAACAGGAAAAGCTCAGATGATATCTCCTGTGTTGTTGTGAGATTTCAGTGA 858 0.4324 MTGREILHKMKCFQEKVLGSSDPDSGKGKSKMSKHITHGFHLVKGRSDHAMEDYLVAQFKQVEDNELGLFAIFDGHSGHSVPDYLRSHLFDNIINEPDFWTDPANAVKRAYSVTDSTILEKSGELGRGGSTAVTAILINCQKLIVANIGDSRAVLSVNGEAKQLSVDHEPNTEWEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSDPYVTVELIGDGAEFIILASDGLWKVMSNQEAVDAIKDIKDARSAAKHLTEAAVNRKSSDDISCVVVRFQ 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc79g00012 285 Pfam Protein phosphatase 2C 48 277 IPR001932 -
Stsc79g00012 285 SMART PP2C_4 32 282 IPR001932 -
Stsc79g00012 285 FunFam Probable protein phosphatase 2C 39 27 285 - -
Stsc79g00012 285 SUPERFAMILY PP2C-like 33 284 IPR036457 -
Stsc79g00012 285 Gene3D - 20 285 IPR036457 -
Stsc79g00012 285 CDD PP2Cc 38 284 IPR001932 -
Stsc79g00012 285 PANTHER PROTEIN PHOSPHATASE 32 284 IPR015655 GO:0004722|GO:0006470
Stsc79g00012 285 ProSiteProfiles PPM-type phosphatase domain profile. 37 284 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc79g00012 Stsc-Chr79 76425 80498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc79g00012 1 285 PP2C-type Phosphatase Gene Family AT3G15260 75.433 3.25e-160 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc79g00012 K17506 - gmx:100787942 476.478