Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc793g00004 ATGGAAAAAAGCAAAGGAAGAGTGTGTGTCACTGGAGGAACAGGGTTTATAGGTTCATGGATCATCAAGAACCTCCTTCAAGATGGTTACTCTGTTAATACAACTGTGAGATCCAACCCAGAAAAAGCAGTGCTTGAATTTGGGGAACAGAATGGATTGGATGTTGTGACTTTGGTTCCAACTTTTGTTCTTGGACCTTTTATTTGTCCTAAGCTACCTAGTTCAGTTCATGCTTCATTGTCCTTGGCGTTTGGTGACAAAGGTCCTTTTGGGTGGCTCCTTCAGGCACCTATGGTGCATGTAGATGACGTGGCAAGAGCCCATACATTTCTACTTGAACATCCTAACCCTAAAGGGAGGTATAATTGTTCATCATCTTTGGTTACTGTTGAAACAATTTCTCAAATTGTTTCGTTTAAATACCCAGAATTTCAGCTGTCAATGCTAGAGTGA 453 0.4106 MEKSKGRVCVTGGTGFIGSWIIKNLLQDGYSVNTTVRSNPEKAVLEFGEQNGLDVVTLVPTFVLGPFICPKLPSSVHASLSLAFGDKGPFGWLLQAPMVHVDDVARAHTFLLEHPNPKGRYNCSSSLVTVETISQIVSFKYPEFQLSMLE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc793g00004 150 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 41 146 - -
Stsc793g00004 150 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 127 IPR036291 -
Stsc793g00004 150 Gene3D - 42 150 - -
Stsc793g00004 150 Gene3D - 5 41 - -
Stsc793g00004 150 Pfam NAD dependent epimerase/dehydratase family 41 122 IPR001509 -
Stsc793g00004 150 Pfam NAD dependent epimerase/dehydratase family 8 38 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc793g00004 Stsc-Chr793 8633 10877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc793g00004 4 31 Monolignol Biosynthesis Gene Families AT2G02400 60.714 2.50e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc793g00004 - - aip:107625960 208.379