Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc793g00002 ATGGAAGGTGGGAAGGGAAGAGTTTGTGTTACAGGAGGTACAGGATTCATTGCTTCGGTTATTATCAAGAGACTCCTTCATGAAGGTTACTCTGTCAATACTACCATTAGATCAAGTCCAGAATTTCATTTTCTTGAAACAATCTCGAGCACAACATATACTTCAAGGGAAAATGACAAAACCGCCCCCGACGAATTTAAAATCCGACAAAGGTGCCCCCAACCTTTGGGAAATATCAAAAAGTCCCCCACCGTGCTGAAAAGTGGACACGTTGCTTCTTCCGTTGAACCGGCCTACGAAGACGTAACGGATTGGTCCTACGTGTCAATAAACGGGGCTTGTGTGGCAAAACGGGATGACAGGGTGGCCCAAGGTTGGAAACGACGAAGCCGAACGACGTCGTTGTGA 408 0.4657 MEGGKGRVCVTGGTGFIASVIIKRLLHEGYSVNTTIRSSPEFHFLETISSTTYTSRENDKTAPDEFKIRQRCPQPLGNIKKSPTVLKSGHVASSVEPAYEDVTDWSYVSINGACVAKRDDRVAQGWKRRSRTTSL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc793g00002 135 Gene3D - 5 68 - -
Stsc793g00002 135 Pfam NAD dependent epimerase/dehydratase family 8 44 IPR001509 -
Stsc793g00002 135 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 47 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc793g00002 Stsc-Chr793 1200 2196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc793g00002 5 37 Monolignol Biosynthesis Gene Families AT1G76470 57.576 3.77e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc793g00002 - K13265 twl:119982963 69.707