Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc78g00008 | ATGTCAGCCACGTCGCCTTCACCGGCGGCTTCTGGTGCCACTCAATCTCCACAACAGCCGCCACCATCACCACCGGCTTCTGGAGCCACTCAACCTCCACAACAACCGCCACCATCACCACCATCTTCGCCTGCGCCTAACACCTCAGCTTCCCCACCGCCGTCGTCGTCAACGCCACCACCATCGACTTCAACCACGCCGTCTCAGTCCCCGCCACCGACGACGACAACGCCATCTTCTCCTCCTCCTCCAACCGTGCCGCCGCCGGTGCAACCGTCACCTCCGCCTTCAAAACCACCGCCTCCTGCTTCACCTCCTCCTTCGTCTGGAAACCTACCTCCGCCTCCAAAAGCTCCTCCGCCTTCAAGAGCACCTCCGCCAACCCCGCCAGAATCAGACCCTCCCCAATCGCCACCACCATCTCCGCCGCCGCCATCACCGGTTCCACCGAGAAGCTCTCCGCCACCATCAAACCCCCCTCCCACGCCCCCATCGAATCCTCCTAAGAGCACATCTCCACCCCCAAACTCACCGCCACCGGAGAATTCACCACCTCCTGTTCCTTCTCCCCCAACAACAGCCGTGCCGCCACCAAGAGGCTCCCCTCCGCCGCCACGGTCTGCGCCACCCCCAAAAACCTCGCCCCCACTTCAACCATCGGTGCCGCCTCCGGTGAATTCTTCACCCCCAAGTCCCGCATCTGTGCCGCCACCAAGATCATCGCCACCGCCGGCATCAACGCCTCCTTCCCGGAACTCACCTCCTCCTTCGATTTCTCCCCCAACAACTGCACCTCCTGCTCCTCCCACAGCACCTATCACTCAACCAGTACCTCCTTCGAATTCAACACCTCGGCCATCATCTTCCCCGCCACCCCCTAATCGGTTAGCGCCATCTCCGGCATCCATTCTCACTCCACCTCGAAACGGATCACAGACAGAGAATTCAGGTCCAACAGCTGGAGGAGGCGGTAATGGAATTGGTACTGCTGCAATAGTGGCTATTAGTTCAGTGGCTGGAATTCTGTTGTTTGGGATCATTGGAGTTGCAATTTGGTGCATGATGAAGAGGAAAAAGAAAAAGGTGCTTAGCAACGGTGGTTATGTCATGCCCACAAATCCTGCCTCATCTCCTGATTCAGATTCGTCGTTCCTTAAGGCACATTCTTCAGCTCCTCTTGTACAAAGCGGCTCTAGCAGTGATGTTTTGTATACACCATCTGATCCTGGTGGACTAGGCCNNNNNNNNNNATGGTTTTCATATGAAGAATTAATTAAGGCCACAAATGGTTTCTCAACCGAAAATCTCTTAGGCGAAGGTGGATTTGGTTCTGTGTATAAAGGATACCTGCCGGATGGGAGAGAGATAGCGGTCAAACAGCTGAAAATTGGCGGTGGTCAGGGAGAGAAAGAGTTCAAAGCTGAAGTTGAGATTATTAGTCGCATACATCATCGTCATCTGGTTTCGCTGGTTGGATATTGCATTCAAGATACCAGAAGACTGCTTGTCTATGACTATGTCCCCAATAATACCCTTTATTTTCATCTACATGAGGAAGGTAGGCCGGTGTTAGAGTGGGCAAACCGTGTAAAAATTGCAGCTGGTGCAGCTCGAGGGATAGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCACAGGGATATCAAGTCATCGAACATTCTTTTAGATTACAACTTTGAGGCTAAAGTTTCAGATTTTGGTCTAGCAAAATTAGCCCTTGATGCAAATACACATATAACCACGCGTGTCATGGGAACTTTTGGGTACGTAGCCCCTGAATATGCATCCAGTGGCAAATTAACTGAAAAGTCTGATGTATATTCCTTTGGGGTTGTGCTCCTGGAGCTCATTACCGGGCGAAAGCCAGTAGATACATCTCAACCCGTGGGAGATGAGAGTTTAGTTGAATGGGCTCGACCATTATTGAGTCATGTACTTGATAGTGGGGAGTTAGGGATTTTAACAGATCCAAGGCTAGAAAAGAACTACATTGAAAGTGAAATGTTCTGTATGATCGAGGTTGCTGCATCTTGTGTTCGGCATTCAGCTGCAAAGAGGCCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGCTTCTGACCTAACAAATGGATTGCGAGTTGGAGAAAGTGAGGCTTTTAACTCTGCGCAGCTATCTGAAGAAATAAGATTGTTTAGGAGAATGGCATTTGGTGATCAAAATTATAGCACTGACTTCTTTAGCCAGGATAGTTTAAATACGTGA | 2277 | 0.5081 | MSATSPSPAASGATQSPQQPPPSPPASGATQPPQQPPPSPPSSPAPNTSASPPPSSSTPPPSTSTTPSQSPPPTTTTPSSPPPPTVPPPVQPSPPPSKPPPPASPPPSSGNLPPPPKAPPPSRAPPPTPPESDPPQSPPPSPPPPSPVPPRSSPPPSNPPPTPPSNPPKSTSPPPNSPPPENSPPPVPSPPTTAVPPPRGSPPPPRSAPPPKTSPPLQPSVPPPVNSSPPSPASVPPPRSSPPPASTPPSRNSPPPSISPPTTAPPAPPTAPITQPVPPSNSTPRPSSSPPPPNRLAPSPASILTPPRNGSQTENSGPTAGGGGNGIGTAAIVAISSVAGILLFGIIGVAIWCMMKRKKKKVLSNGGYVMPTNPASSPDSDSSFLKAHSSAPLVQSGSSSDVLYTPSDPGGLGXXXXWFSYEELIKATNGFSTENLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEKEFKAEVEIISRIHHRHLVSLVGYCIQDTRRLLVYDYVPNNTLYFHLHEEGRPVLEWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPVGDESLVEWARPLLSHVLDSGELGILTDPRLEKNYIESEMFCMIEVAASCVRHSAAKRPRMGQVVRAFDSLGASDLTNGLRVGESEAFNSAQLSEEIRLFRRMAFGDQNYSTDFFSQDSLNT | 758 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc78g00008 | 758 | SUPERFAMILY | Protein kinase-like (PK-like) | 414 | 702 | IPR011009 | - | |
Stsc78g00008 | 758 | PRINTS | Proline rich extensin signature | 62 | 87 | - | - | |
Stsc78g00008 | 758 | PRINTS | Proline rich extensin signature | 4 | 25 | - | - | |
Stsc78g00008 | 758 | PRINTS | Proline rich extensin signature | 25 | 41 | - | - | |
Stsc78g00008 | 758 | PRINTS | Proline rich extensin signature | 43 | 60 | - | - | |
Stsc78g00008 | 758 | Gene3D | Transferase(Phosphotransferase) domain 1 | 507 | 717 | - | - | |
Stsc78g00008 | 758 | MobiDBLite | consensus disorder prediction | 15 | 300 | - | - | |
Stsc78g00008 | 758 | MobiDBLite | consensus disorder prediction | 304 | 322 | - | - | |
Stsc78g00008 | 758 | Gene3D | Phosphorylase Kinase; domain 1 | 412 | 506 | - | - | |
Stsc78g00008 | 758 | CDD | STKc_IRAK | 437 | 707 | - | - | |
Stsc78g00008 | 758 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 551 | 563 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc78g00008 | 758 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 404 | 506 | - | - | |
Stsc78g00008 | 758 | SMART | serkin_6 | 431 | 704 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc78g00008 | 758 | MobiDBLite | consensus disorder prediction | 1 | 328 | - | - | |
Stsc78g00008 | 758 | ProSitePatterns | Protein kinases ATP-binding region signature. | 437 | 459 | IPR017441 | GO:0005524 | |
Stsc78g00008 | 758 | Pfam | Protein kinase domain | 432 | 638 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc78g00008 | 758 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 342 | 739 | IPR047117 | - | |
Stsc78g00008 | 758 | FunFam | proline-rich receptor-like protein kinase PERK8 | 507 | 718 | - | - | |
Stsc78g00008 | 758 | ProSiteProfiles | Protein kinase domain profile. | 431 | 707 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc78g00008 | Stsc-Chr78 | 68771 | 73236 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc78g00008 | 419 | 728 | Trihelix Transcription Factor Family | AT4G32710 | 62.300 | 9.15e-131 | 404 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-1 | Stsc78g00008 | Pkinase | 8.9e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc78g00008 | - | - | gmx:100794393 | 741.495 |