Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc788g00003 ATGGAACGTGTGGTTCTTGATAGCATAATCAACAGGCTTCTTGAAGTAAGAGGCAAACCAGGGAAGCAGGTGCACCTTTCTGAGCCTGAGATCAGGCAGCTATGTCTTGTCTCCAAGGACATCTTCTTGAAGCAGCCTAATCTCTTGGAACTTGAAGCACCAATCAAGATCTGTGGGGATATCCATGGCCAATATTATGATCTTCTGAGAATTTTTGAGAATGGAGGATTCCCACCTCGTTCCAATTACTTGTTCTTAGGAGACTATGTTGATCGAGGGAACCAAAGTATTGAGACAATATCACTTCTTCTAGCATACAAAATCAAATACCCTCAGAACTTTTTCCTCCTCAGGGGGAACCATGAATGTGCCTCCATAAACCGCATCTACGGTTTCTATGATGAATGCAAGAGAAGATACAGTGTCAAGCTGTGGAAAACATTCACGGATTGCTTCAACTGCTTGCCTGTGGCGGCACTCATCGATGACAGGATACTCTGCATGCATGGTGGACTGTCTCCTGAGTTGCACAACTTGAACCGGATAAGGACTTTGCGCCGCCCGGTCCAAGTGCCGGAGAGTGGTTTGCTATGTGATCTTCTTTGGTCTGATCCTTGCAGAGACATTCAAGGATGGGGAGGGAGCGAACGCGGAGTTTCGTGTACTTTCGGCCCCGACAGGGTCACTGAGTTTCTGAGGAAGCATGATCTTGATTTGATCTGTAGAGCACATCAGGTGGTGGAAGATGGATATGAATTCTTTGCTAATAGGCAACTTGTGACTATCTTCTCTGCACCGAATTACTGTGGGGAATTTGACAATGCTGGTGCTGTGATGAGTGTTGATGAGACACTTGTGTGTTCTTTCCAAATATTGAAGCCTCTTGAGAATCAAAAGCAGCAGCCTTATAAGTTTGGCTATGGAAGCAAAACTACACAAGCATTTCTTGGTGCAAACTCATGA 963 0.4528 MERVVLDSIINRLLEVRGKPGKQVHLSEPEIRQLCLVSKDIFLKQPNLLELEAPIKICGDIHGQYYDLLRIFENGGFPPRSNYLFLGDYVDRGNQSIETISLLLAYKIKYPQNFFLLRGNHECASINRIYGFYDECKRRYSVKLWKTFTDCFNCLPVAALIDDRILCMHGGLSPELHNLNRIRTLRRPVQVPESGLLCDLLWSDPCRDIQGWGGSERGVSCTFGPDRVTEFLRKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAVMSVDETLVCSFQILKPLENQKQQPYKFGYGSKTTQAFLGANS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc788g00003 320 SMART pp2a_7 26 296 IPR006186 GO:0016787
Stsc788g00003 320 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Stsc788g00003 320 FunFam Serine/threonine-protein phosphatase 1 304 - -
Stsc788g00003 320 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Stsc788g00003 320 SUPERFAMILY Metallo-dependent phosphatases 19 306 IPR029052 -
Stsc788g00003 320 CDD MPP_PP1_PPKL 5 294 - -
Stsc788g00003 320 Gene3D - 1 305 IPR029052 -
Stsc788g00003 320 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Stsc788g00003 320 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Stsc788g00003 320 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Stsc788g00003 320 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Stsc788g00003 320 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Stsc788g00003 320 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Stsc788g00003 320 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Stsc788g00003 320 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Stsc788g00003 320 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc788g00003 Stsc-Chr788 23079 25359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc788g00003 33 242 Calmodulin-binding Proteins AT5G63870 32.000 5.70e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc788g00003 K06269 - gmx:100791655 556.599