Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc784g00007 ATGCTTTATATTACATTGCATCCCGAAAATAAATGCATAGCATGTGAAATAGAGGATTTTGATGTCGGAAAGCACGACTGGTGCTTCATTGCTTGTCATGACTGTCACAAGAAATGTAAAAACGTGGATGATCATTTCTATTATGATAACTGTAATAAACCTCCTGAAAAGGTCGAGCTCAGATATAAACTCTTTGCATATGTTAGTGATCATTCCGGAAGCATGTGTGTTGTACTTTGCGACACTGAAGCTACCCAGATTGTCGGGCTCAATGCAGAGAAAGTCAGGAACTTGAACAAGGAGGGAGATGATGACTCATATCCTGCAGTGTTTAAAAAGGCTTTGGAAAAGAAGGTGTTGCTTAGAATAAGTATTAAAAGTGGTAACATCTCTGGAACGAAATTTGTGTACAGTTTATGTCACGCAGAGCCATGGTGTGCTTTTCATGTGGAGGAGAACACTGCTAGCATTGGTTGTTCTTCTGATGTTATCCCTCTTGGTAGCTTGGACTCAGTTCAACCTGGGCAGGAGTCCGTCAACGAGTCCAAGACAGTAACCAGCTCCAAGGCAAGGGGGAGACGTATTAATTCAGGAGTTTTAGGCGAAGTGGCCATTGATCTGGAAGAAATCCCGTTAGGGCAGCTGTCAACAACAAAGAGGGCACGAGTCAGTATTAAGAAAGAGGAGAACAACTAA 696 0.4224 MLYITLHPENKCIACEIEDFDVGKHDWCFIACHDCHKKCKNVDDHFYYDNCNKPPEKVELRYKLFAYVSDHSGSMCVVLCDTEATQIVGLNAEKVRNLNKEGDDDSYPAVFKKALEKKVLLRISIKSGNISGTKFVYSLCHAEPWCAFHVEENTASIGCSSDVIPLGSLDSVQPGQESVNESKTVTSSKARGRRINSGVLGEVAIDLEEIPLGQLSTTKRARVSIKKEENN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc784g00007 231 SUPERFAMILY Nucleic acid-binding proteins 11 133 IPR012340 -
Stsc784g00007 231 CDD RPA1_DBD_C 15 132 IPR047192 -
Stsc784g00007 231 Gene3D - 4 153 IPR012340 -
Stsc784g00007 231 Pfam Replication factor-A C terminal domain 24 131 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc784g00007 Stsc-Chr784 19341 20389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc784g00007 27 134 Core DNA Replication Machinery Family AT5G61000 29.091 1.34e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc784g00007 - K00280 ahf:112716567 241.891