Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc782g00006 ATGGCGGGTGTTCAACTCACCCCATCGGCGATAACCACAATTTGCGGGAACGATTTCAGTTTGCTTCAGAATCTGAGGCCGGTTTTGCAAGTCATCGACGTGAAGCCTTTGTCGTCGCCTGAGACCAGGTACCGCTTGATGCTCTCCGACGGCTCTCACTACCATCAATCCATGCTCACTATCATGAACAACCACTTGCTCGTTTCCGGCATCTTGCAAACTGGGTCCATTATCCTCCTCACTAATTTCACCTGCCCCGTTGTCCAGAACCGGCCGATTATCATCATCATTGATCTAGATGTGATACTTGAAAAATGTAATCTGATTGGAACTCCTGTGTCAGTGAAATTCGGTGGATCTTATGCAAATCAAAACATGGGTTTCTGCAATCCTGAATCTCAGGCTTCAGGTCCCTTTCAAGATTCATATATTCATCAACCTCAGTCCATGCATCAACCACCAATGAAAATGCCTGAGGCAAAGGAAAATTTCACACCATCATCCTTGGATATTCAAGCTGTCTTGAAGAGGTGTGAAACCGTTGAAAAGGAAGTTCAGTCATTAAAAGATAGTTTGTCTCTAATCAACAGGAAGGATTCTGAACAAAGGAAGCAGATAGAAGACCTTCGGAAGCAGAATGCAGAGTTGGCCGGAGAGAAAGAGCGCCTTTTACAAGCCATTCAGGGAATTTTGTCTGAAAATTAA 705 0.4454 MAGVQLTPSAITTICGNDFSLLQNLRPVLQVIDVKPLSSPETRYRLMLSDGSHYHQSMLTIMNNHLLVSGILQTGSIILLTNFTCPVVQNRPIIIIIDLDVILEKCNLIGTPVSVKFGGSYANQNMGFCNPESQASGPFQDSYIHQPQSMHQPPMKMPEAKENFTPSSLDIQAVLKRCETVEKEVQSLKDSLSLINRKDSEQRKQIEDLRKQNAELAGEKERLLQAIQGILSEN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc782g00006 234 PANTHER PROTEIN CYCLOPS 156 233 IPR040036 GO:0005634|GO:0036377|GO:0043565
Stsc782g00006 234 SUPERFAMILY Nucleic acid-binding proteins 4 110 IPR012340 -
Stsc782g00006 234 Coils Coil 171 226 - -
Stsc782g00006 234 FunFam Replication protein A subunit 5 116 - -
Stsc782g00006 234 Pfam Replication factor-A protein 1, N-terminal domain 6 103 IPR007199 GO:0003677|GO:0005634|GO:0006260
Stsc782g00006 234 Coils Coil 232 234 - -
Stsc782g00006 234 Gene3D - 4 116 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc782g00006 Stsc-Chr782 22481 24192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc782g00006 1 137 Core DNA Replication Machinery Family AT4G19130 36.301 6.55e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc782g00006 - K07466 adu:107487113 342.813