Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc775g00004 ATGTGCTTGGAGCAACCACTATCTACGAACCATTTCGATTTCTTTGCTCCCAAGCGTTCCTACAAAACAAATTCAAAATTTTGTTTTAGCTCCAAAGGAGAGCCTCCCTCGTCTGTGGTGTGCTCACCCTTCGAAGCTCTCGTGCTTGTCGCCGTCGTAGCCACCGCGCCGCTTTCGTCCTCAACCTGGTCTCGACATCATTCAAGGAAGGATGAATCAAAGTTATATATGTTTCTTGAGCTTGTAACCAAAGGTTCTCTTGCAAGCCTTCATCACAGGGATATTAAATGTGCAAATATATTGGTTGATGCAAATGGATCTGCCAAGCTTGCTTATTTTGGATTGGCAAAGGCAACCAAATTGAATGACATTAAATCATGCAAAGGGACATCATTGTGGATGGCTCCTGAGATTTGA 417 0.4365 MCLEQPLSTNHFDFFAPKRSYKTNSKFCFSSKGEPPSSVVCSPFEALVLVAVVATAPLSSSTWSRHHSRKDESKLYMFLELVTKGSLASLHHRDIKCANILVDANGSAKLAYFGLAKATKLNDIKSCKGTSLWMAPEI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc775g00004 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc775g00004 138 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 92 137 - -
Stsc775g00004 138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Stsc775g00004 138 Gene3D Transferase(Phosphotransferase) domain 1 52 138 - -
Stsc775g00004 138 Pfam Protein kinase domain 90 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc775g00004 138 SUPERFAMILY Protein kinase-like (PK-like) 67 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc775g00004 Stsc-Chr775 15847 20944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc775g00004 70 138 MAP Kinase Kinase Kinase AT4G08500 53.535 1.84e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc775g00004 Pkinase 3.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc775g00004 - K13414 sly:101263165 110.153