Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc77296g00001 ATGCTCTTCATCATCCGCGGTCGCCTAGAAAGTGTCACCACAGATGGTGGAAGGAGTGGATTCTTTAACAGAGGGCTTCTCAAAGAAGGAGACTTCTGTGGAGAGGAGCTACTAACATGGGCACTAGATCCAAAAGCTGCTGCAAACTTGCCATCATCTACTAGGACAGTGAAGGCCATAAATGAGGTCGAGGCATTCGCATTGGAAGCCGAGGAGCTTAA 221 0.4887 MLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAAANLPSSTRTVKAINEVEAFALEAEEL 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc77296g00001 73 Gene3D Jelly Rolls 1 73 IPR014710 -
Stsc77296g00001 73 ProSiteProfiles cAMP/cGMP binding motif profile. 1 47 IPR000595 -
Stsc77296g00001 73 SUPERFAMILY cAMP-binding domain-like 1 72 IPR018490 -
Stsc77296g00001 73 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc77296g00001 Stsc-Chr77296 4 224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc77296g00001 1 73 Ion Channels AT1G19780 94.521 1.25e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc77296g00001 K05391 - thj:104812411 122.479